Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0526 ATGGGTTTGCTTTCATCTTCTTATTCTTCTTCTTTCACCACTTTTGCTCTATTCCTCTTTCTTGTACAATTATCTTGCTTCTTCAATAACCTTAATGCAAAGCATAGTGTGGCCAATAGTCACAACAGGCGTGGCCACCATCACCACCACAACACCCAGAATCCCCCATTGAATCCGAGGCTTGATCGCGCCTTTCTTGCGCTGCAAGCATGGAAGAGTGTCATCTATTCCGACCCAAAAAACTTCACTGCCAATTGGGTAGGTCCTAGAGTTTGCAATTACACAGGTGTGTATTGTGCTCCATCACAAGATGACCCTAAAGTGACAGTTGTAGCAGGCATTGACCTTAACCACGGCGACATAGCCGGCTTCCTACCGGCWGAATTAGGCCTGCTTTCAGACCTTGCTCTGCTCCATCTCAACAGCAACCGCTTCTGCGGCATCCTCCCAAGAACACTAAGCAACCTCAGYCTCCTTCACGAGCTTGATCTTAGCAACAACAGATTTGTTGGACCTTTTCCAACGGTTGTTCTTTCCCTTCCTTCCCTCAGATACCTTGACATTCGGTTCAACGAATTCGAAGGCTCATTGCCTGTTGATCTCTTTAACAAAACCTTTGATGCAATATTTCTCAATAACAACCGTCTTAGCAGTTCCATCCCACGAAGCTTCGGCCGAATCTCGGCCTCTGTCCTGGTTTTYGCCAACAACAGATTCGGAGGCTGTCTTCCAGAAAGCATAGTRAACTTAGCTGAAACACTGGAAGAGCTTGTCATGATCAACACCAGTTTACAAGGTTGTTTGCCACAGCAAGTTGGATTTCTCTACAAATTAAGAGTATTTGATGTTAGTTTCAACAAAATTGTTGGCCCAATTCCTTATAGCCTTGCAGGGCTTTCTCATTTGGAGCAGCTCAATTTGGCACACAATATGATGACCGGCATAGTCCCTATGGGAGTTTGTGAGCTTCCCAACTTGGCWAATTTCACATTTTCTTATAACTTCTTCTGCGAGGAAGAGGGAATTTGCCGGAACTTGACATCSAAAAGAACTGTCTTTGATGATCGCCGCAACTGTTTGCCGGAGAARCCGCTACAGAGGAGCAAGAAGGAGTGCAATGCTGTAAATCAGAACCCTGTTGATTGCATAAAACTTTGTTGTACCACAGAAGGTGGTTTTGGAAACAATGYCACAAGTTCTAGCTCAATGCCAACAATGCCTATTTCTGCACCTCCTTTTATTGCACCAAGCCACCCATGA 1260 0.4476 MGLLSSSYSSSFTTFALFLFLVQLSCFFNNLNAKHSVANSHNRRGHHHHHNTQNPPLNPRLDRAFLALQAWKSVIYSDPKNFTANWVGPRVCNYTGVYCAPSQDDPKVTVVAGIDLNHGDIAGFLPAELGLLSDLALLHLNSNRFCGILPRTLSNLSLLHELDLSNNRFVGPFPTVVLSLPSLRYLDIRFNEFEGSLPVDLFNKTFDAIFLNNNRLSSSIPRSFGRISASVLVFANNRFGGCLPESIVNLAETLEELVMINTSLQGCLPQQVGFLYKLRVFDVSFNKIVGPIPYSLAGLSHLEQLNLAHNMMTGIVPMGVCELPNLANFTFSYNFFCEEEGICRNLTSKRTVFDDRRNCLPEKPLQRSKKECNAVNQNPVDCIKLCCTTEGGFGNNXTSSSSMPTMPISAPPFIAPSHP* 420
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0526 419 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 418 - -
Amo03g0526 419 Pfam Leucine rich repeat 135 192 IPR001611 GO:0005515
Amo03g0526 419 MobiDBLite consensus disorder prediction 398 419 - -
Amo03g0526 419 MobiDBLite consensus disorder prediction 39 53 - -
Amo03g0526 419 Pfam Leucine rich repeat N-terminal domain 65 99 IPR013210 -
Amo03g0526 419 MobiDBLite consensus disorder prediction 39 59 - -
Amo03g0526 419 Gene3D Ribonuclease Inhibitor 231 375 IPR032675 -
Amo03g0526 419 Gene3D Ribonuclease Inhibitor 64 230 IPR032675 -
Amo03g0526 419 PANTHER EXTENSIN-LIKE PROTEIN 7 418 - -
Amo03g0526 419 SUPERFAMILY L domain-like 65 352 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo03g0526 Amo-Chr3 9744015 9745274 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0526 58 411 Trihelix Transcription Factor Family AT2G15880 52.542 5.16e-137 407
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0526 - - adu:107478209 759.214