Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0522 ATGAAAAGAGAAACACTAGATGGAGTAGTTGATTGTGGTGCTAATAAGGGTGCTAACAAGATCGCTGAGAAGGACCCAAACGACGCTTCTAACTGTGCAATTGATGGAGTCACAGATGATGTCGACCCAGAAAGCACCGGAATCACCGGCGGCGACGACAACTCGGCTCTCTCTCGCACCGGCGCCCTTGGGTCGCTCTCCCTCGCGTTTCTCTCTCACTCACAGCTGCGCAGACCGAAGGCTCCCTCTTTCTCTGCTCTGGCTATTAACAGCTGTAGAAGGCCGTACATTTTCGACCTTCAAGGAGGATCTCTAAACAGTCTTCTGGCTGAAAGTACTTGGTCTGTTTCCACCCTTACCATAGTGGGTGCTCTAGAATTTGAAATAGATCTGTTGTCACCTCACTGTGCGATCACTCACTCAATGTCTGGAACTCCTCTCTCCAGTCACAAGCATCACCTCCCCCCCTTAAAATATGTTTTCATGTCCGATTGGTGGCTTGCCAAGCCTTGCCTTCCACTCCAGGGTTTAGCGGTTGGTGGCATTGCTTATGGCCAGAGAGAGAGAATGTTCTTATCGACAGTGATTGCAAAGAGGCACGAGGCGAATGTCTTGGAGACTGAAGACGGAGTCACTCTTCACTTTAGTAGTTTCATTAACAGCTCTCGCTCGTTTCAGAATGGCTTCCCACGTGAGGTATGTGAAGACTTCTTGTTGGGATTTCCAGACGATTGGCAAAAGTACACTGCTCATAGTTTTAGAGCTAAATGTGTCGATGGGGATACTGGATTTTGTGAGCTAAATGCTTCTTTACACAAGAGGGCTATTGATCCTATCCCATTTTCCATTCGTGATAATCGTTCGGCAGAGAGACATGATTTTTCATTGTCCAATGATGGAATTCTCGAAGCAAAAACGAATATCTGCAATGAACCAGAGAATTCAATTGTCAATGTTTTAAAGCAATCCGTATCAAAAAATAGTGTGGAATGCAGCAATATCAAGAAAACTGTGGAGGGTGAACGCAAGGACAATATTGTGAGTCTTAAATCGTCTCAGTCACCTGTTGACACGATGGATGATGGTGAAAATGGAGTCTTAGTAGCTGCACCAATAAGCCAAGTTGGAAATCCAAACAACGATCAATCTTTGACAGGTGTGTTTGACCGGAGTCCATGTAAAGTTCATTCTGGGAAAAGCATGGTTGGATCTCCAGTTTCGACAACGAAAATCAGAGTAACACAATCATCGGGTGACTGCAAGGAGGAACATGTTAGTCACACTAGAAAATGTTCGAAAAAAAATCTCACATCACTCAAAGAAACCAGTTCTTGTCCAGTTAGAAGATCTCCCAGGCTGCAAAGTAAACGAAATGAGCAAGTAAAACCTGTATGA 1395 0.4487 MKRETLDGVVDCGANKGANKIAEKDPNDASNCAIDGVTDDVDPESTGITGGDDNSALSRTGALGSLSLAFLSHSQLRRPKAPSFSALAINSCRRPYIFDLQGGSLNSLLAESTWSVSTLTIVGALEFEIDLLSPHCAITHSMSGTPLSSHKHHLPPLKYVFMSDWWLAKPCLPLQGLAVGGIAYGQRERMFLSTVIAKRHEANVLETEDGVTLHFSSFINSSRSFQNGFPREVCEDFLLGFPDDWQKYTAHSFRAKCVDGDTGFCELNASLHKRAIDPIPFSIRDNRSAERHDFSLSNDGILEAKTNICNEPENSIVNVLKQSVSKNSVECSNIKKTVEGERKDNIVSLKSSQSPVDTMDDGENGVLVAAPISQVGNPNNDQSLTGVFDRSPCKVHSGKSMVGSPVSTTKIRVTQSSGDCKEEHVSHTRKCSKKNLTSLKETSSCPVRRSPRLQSKRNEQVKPV* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0522 464 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 154 427 - -
Amo03g0522 464 MobiDBLite consensus disorder prediction 415 464 - -
Amo03g0522 464 MobiDBLite consensus disorder prediction 416 436 - -
Amo03g0522 464 MobiDBLite consensus disorder prediction 437 451 - -
Amo03g0522 464 Pfam SANTA (SANT Associated) 160 248 IPR015216 -
Amo03g0522 464 PANTHER MIS18-BINDING PROTEIN 1 154 427 IPR039110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0522 Amo-Chr3 9699359 9704223 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo03g0522 SANTA 1.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0522 - - adu:107478102 659.833