Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0507 ATGGAGGGTGGTGGTTCAGAAGAAGAGAAGAGGAAGGAGAAGCCAGCGGAGGTTGAGAACAAGATCAAGCGCAGAATGAAGACTGCTTTTCAGTTGGAAGTTCTGGAGAAAACTTATGTTGGAGAGGCTTACCCTTCAGAAGCAGTGCGAGCTGAGTTATCTGCGAAGCTGGGTCTGTCTGATCGTCAACTGCAAATGTGGTTTTGTCACCGGAGGCTGAAGGATAGGAAATCAGCACCAACAGCGAAGAAGCCCCGAAATGATCACCCGCCTGTGGCACGGGATTCAGTGCCCGTAGGAGAGGGTCTTGAGCAAATGGCAGTGGCTGATGCCATGCATGATTGTGGTTTAGCTTCTGGGTTGAAGCCATTTGGATATTCGGATCCAAGGCAAGTTGTTCCAAATCCTTCGATTTCCTTTCCTAGAACAGGAGCTGGATTGCCAACAATGGAGAACAATAGTTACTATGAACCACATCAGGCCATCGAGGTGCTGCGAGCAATTACGTTTGTGGAGAGACAGTTGGGTCAGCCATTAAGAGAGGATGGACCAATTCTGGGAATGGAATTTGATTCCTTGCCCCCAGGGGCATTTGGTGCCCCAATAGAGGAAGTGACATTGGGACAGCATAGGCATTCTGGAAGCCCTTTCGAGGCAAAAATTTATGATCAACGAAACAAGGGCATTCCAAGGACTCTCCACGAGTATCAGTTTATTCCAGAGCAGCTAACTGTTAGAAATGAGACATTTGACAGAGTTGCCCCCACTATCCATTACAGTTCTCCTGATTGCATTTCACATTCCAGGACTTCACTACCTAGCCAGAAATCTTTGCTTGGTGGGAATGAATCTACACCATATGGATATGGAGTTCAAGATCAGATGCCTGCTTTGAATCATTTGTCTCAGCATGTCAGGCAGAATCATGTTTTGCCTTCTGCTTCTGGACAGATTGAGGGTATTCCACGAAAGAACACATTTGTTGATGTAACAGTTGTTACTCATAGTGGGGTTCACCCAATAACTCTGACTGACACTGCACTAGTGCCATCTGACAACACGGTTATCCATGAGGAGGAACCTTCAAGGTTTCAGAGGAAGCGAATGAATGAAGAAGCTAGAATACGTCGTGAACTTGAAGCTCATGAGAAAAGAGTTAGAAAAGAGATTGGAAAACAGGATATTCTAAGGCGAAAGAGGGAAGAGCAAATAAAGAAAGAGATGGAGAGGAATAACCGTGAAAGGCGGAAAGAAGAAGAAAGGTTGTTACGTGAAAGACAGCGAGAGGAGGAGAGGTACCAAAGAGAACAGAGGCGTGATCTGGAGCGTAGGGAGAAGCTTTTACAGAAAGAATCAATYAGAGCTGAGAAACTGAAACAGAAGGAAGAACTACGCAGGGAGAAAGAGGCAGCAAGGATCAAAGCTGCTTATGAGAGAGCTCTTGCCCGCAGAATGACCAGAGAATCAATGGGACTTATTGAAGATGAACGTCTGGAACTCATGGAACTAGCTACATTGAAGAAGAGACTTCCTTCGATACTGGCTCTTGATTATGAAACTATGCAAAATCTCGAGTTATATAGAGATGGGCAAACACCATTCCCACCCAAGTCTGTGCAGTTGAAAAAACCATTTTCAATCCAACCTTGGTCAGACTCTGAGGAGAAAACAGGAAATCTTCTCATGGTTTGGAGGTTTTTGAATACTTTTGCTGATGTTCTTGGAATATGGTCGTTTACCTTGGATGAACTTATTCAAGCTTTCCATGACTATGATCCAAGGTTGTTAGGTGAAATTCATATTGCTCTTTTGAGATCTATTATGAAAGATATTGAAGATGTTGCAAGAACTCCCTCCACTGGATCAGGAGGTAACCAAAACAATGTTGCCAATTATGGTGGGGGGCATCCTCAAGTAGTTGAAGGGGCATATGTGTGGGGTTTTGATATAAGAAATTGGCAACGGCATTTAAATCCATTAACATGGCCTGAAATTTTGCGGCAGTTTGCTTTGTCAGCTGGATTTGGCCCAAAATTGCAGAGACATAGTGAATTGGTGCATCCTTGTGATAACAATGAGGGTCATGATTGTAAAGACATAATCTCTCATCTGCGCAGTGGAGCTGCAGTAAAAAATGCAGTTGCTATCATGCAAGAGAAGGGATTATCTAAGCCAAGTAGATCAAGACATCACTTGACTCCTGGAACTGTTAAATTTGCTGCATTTCACGTCCTTTCTGTTGAAGGGAGCAATGGCCTCAATATATTGGAAGTTGCAGAGAAAATTCAGAAATCTGGGCTCCGTGATCTTACAACAAGCAAAACTCCAGAGGCTTCTATATCTGCTGCATTGTCTAGAGACACAAAGCTATTTGAAAGGATCGCTCCTTTGACGTATTGTGTACGCCCTGCATATCGAAAGGATCTGTCTGATGCTGAAGCAATTTTTTCAGCTGCCAGGGAAAGAATCAGGGTATTCAAAAGTGGATATATGGATGCTGGTGAAGCAGAAGAGGGGGGAAGAGAAGATGATTCTGAAAATGATGTAGCAGAAGATATTGAAACCGATGATTTAGGAGCTGAAACTAATATAAAAAATGGGGGTTTCAGTTCTGTAGAATTTAATTCAAAAACCGTAATGAGAATTAGAAAGGACACTGGTAAGGTTTCTCAAACACTTGGTTGCTATGACCATGAGAAACTGGATGAGGATATACTGTCAATTGTTTCTGAAGGCATTGATATGCACAAAGGGATTAGTGCCTCTTGTGATATTGCTGTTTGCAGCAATGYTGTGTCTAATCCTAATCTTGAAGGTATGGATATTGATGAAAGCATTCCAGATGAGTCGTGGGTACAGGGGTTYATGGAAGGAGAGTACTCTGACCTCAGTGTTGAGGAGCGTCTTAATGCTCTCGTTGCTTTGGTTAATGTGGCAATTGAAGGGAACTTAATTCGTGTTACACTTGAGGATCGTCTAGAAGCTGCAAATGCTTTAAAGAAGCAGATGTGGGCAGAAGCACAGCTGGGTAAACGTCGTATCAAAGAGGACTACTTTGTTAAGATGCATCCTGTATCTAATTTCAGCAACAAGAGTGAATCAAATAGTGCATTTCCATCACTTGAGGGCAAACAGAAGCCATTCCTTTCTGTTGATAACAAGAACGACGAGGCTTTATTAACCCCTCTTGGCCGGTGCAACCAGATCAACGAACTACTGGAAAATCCAAATCATATTGAGAGTTCCTCATTTGAAGTTAGCCACCAGCTCCATCGAAGTTCTGCTAACCAAGATAATTATTCTTTTCAACAATTTGGATTTGCTCCTGAAAAATCAAGGTCAAATATAAAATCTTACATTGGTTACTTGGCAGAACAAACCTACATGTATAGGACATTGCCTCTTGGCTTGGATCGCAGACATAACCGATACTGGCAGTTCATTYCATCTGCTTCTCCAAATGATCCTGGTTGTGGCAGGATTTTTGTGGAGTTGCATGATGGTTGTTGGAAATTGATTGATTCTGAAAAGGGATTTGATTCCCTATTGGGTTCGTTGGATGTACGTGGGATCAGGGAGTCACACTTGCATATGATGTTGCAAAGTATRGAGATGGCGTTCAAGGAATCTATTAGAAGGAATGTCCATAATGGTGATGCAAGAATGGAGAATGGGGACACTGTCAAGAGGCTCAAGACAGAAGCTTTTGAAGTGGATACGAACAATTATTGTAGTGATATTCACCATCCTACATCTGTGTGCATCGATAATTCAGATGCTTCAYAGGTCTCGACATCTTTTGCAGTTCAGCTTGGAAGAAATGAAGCTGAAAACAGGGATGCTCTTCTGAGATATCAGGACTTTGAGAAATGGATGCTAAATGAATGCCTAAATTCGTCAATATTATGTGCCTTGAAGTTTGGGAAGAGGAGGCGTAGCAAACTGTTGACTGTGTGTGATTCATGTCATGATGTTTATTTCTTTGATAGAATCAAATGCCCTTCCTGCAATAGAACTCTCAATGCTCACGGCAAGGCAAAGATTGACACTGATTATTTTCATGTTTCATCTTATCTTCCTTTGAGAATGAGATTGCTGAAGGTCTTATTGTCAATTGTTGAGGTTTCTGTTCCCGAAGAAGCTTTTCACGGTATTTGGACCAACAGTTATAGGAAATCATGGTGTACAAAACTGGATGCTTGCTCATCAACTGAAGACCTCCTGGAGATATTAACTGTATTAGAAAGCGCTATAAAGAGGGAGTATTTGGATTCAAACTATGAAACTACCTCTGAGCTGCTGGGTTCGTTTAGTTCTTCTGGATGTCCTCCAACTAATGATTTTGTAGGTGCTGAAAGGATACTTCCATGGGTGCCGTGCACAACAGCTGCGGTGGCTCTGAGACTCATGGAACTCGATGCATGCACCTCTTACACCTTTCAGCAGAAGATGGAGTCTGAAAAGGATAAAAGAATTGGAATTGTTATGAAGCTTCCGACAAAATATGCTTCTGCCAAATCATCCTGCCGTGATAGTGCAATTGAAGAAAGAGGACAAACGTCCCAACAGGGACAAAGATCCCAGCAGGGACAAAGCATGCATAAGGTTAAGCATACTGTTGAAAACATGGTTGGTCTTGGTGCTGGCCTTGCAAGTTACAGCAGAGGACAAAGGTCCCGACAGGGCTGGAGCCATTCTTGTGTGAGTGGGAGATCACAAGGACGGATTCTTAGTTCAAGACATGATTCTAGAAAGAGAAGCACGACCTCTAGCAGCATGAAAATAGGAAATTTACTTGGATGGAAAGGGAGACCATGTAGGCATGCAGAACAAAATGTACGTGGTCGTCGGAGTGTTCGAAGTAGGCAGAAACCGGCTGTCAAGGTCTGTGTCACCGGTGTTGAGAAGGACACTCCAGATGATATCACAGGGTATACAGCTGGTATCTTTATCAATGAAAAGATGAATGGAAGTGAAGTGGAAGCTGCTGCTAGAAGTGTTAGCAGCTCAGAAAAATCGGCCTATGAAAATGATATTTATCAGTCAACAGTTGATGCGTATGAATATCTAATTGATGATAATAATAATGATGGATATGAGGGTGGATTTAGTGGAAAATCTGAGAACTTTGTAGAGGGGAGCAACCGTAATGTGGATGATGATGAAAATGAGGACGTTGATGACAATGATGATGAAGACGGACAAGTTGATGTTGAAGATTATATAAGCCACAAATCAGATACTGACGCCGGAGAAAATGCCGACCAGAACATGGATCCTAATGGAACAGATTCAACTTAA 5301 0.4252 MEGGGSEEEKRKEKPAEVENKIKRRMKTAFQLEVLEKTYVGEAYPSEAVRAELSAKLGLSDRQLQMWFCHRRLKDRKSAPTAKKPRNDHPPVARDSVPVGEGLEQMAVADAMHDCGLASGLKPFGYSDPRQVVPNPSISFPRTGAGLPTMENNSYYEPHQAIEVLRAITFVERQLGQPLREDGPILGMEFDSLPPGAFGAPIEEVTLGQHRHSGSPFEAKIYDQRNKGIPRTLHEYQFIPEQLTVRNETFDRVAPTIHYSSPDCISHSRTSLPSQKSLLGGNESTPYGYGVQDQMPALNHLSQHVRQNHVLPSASGQIEGIPRKNTFVDVTVVTHSGVHPITLTDTALVPSDNTVIHEEEPSRFQRKRMNEEARIRRELEAHEKRVRKEIGKQDILRRKREEQIKKEMERNNRERRKEEERLLRERQREEERYQREQRRDLERREKLLQKESIRAEKLKQKEELRREKEAARIKAAYERALARRMTRESMGLIEDERLELMELATLKKRLPSILALDYETMQNLELYRDGQTPFPPKSVQLKKPFSIQPWSDSEEKTGNLLMVWRFLNTFADVLGIWSFTLDELIQAFHDYDPRLLGEIHIALLRSIMKDIEDVARTPSTGSGGNQNNVANYGGGHPQVVEGAYVWGFDIRNWQRHLNPLTWPEILRQFALSAGFGPKLQRHSELVHPCDNNEGHDCKDIISHLRSGAAVKNAVAIMQEKGLSKPSRSRHHLTPGTVKFAAFHVLSVEGSNGLNILEVAEKIQKSGLRDLTTSKTPEASISAALSRDTKLFERIAPLTYCVRPAYRKDLSDAEAIFSAARERIRVFKSGYMDAGEAEEGGREDDSENDVAEDIETDDLGAETNIKNGGFSSVEFNSKTVMRIRKDTGKVSQTLGCYDHEKLDEDILSIVSEGIDMHKGISASCDIAVCSNXVSNPNLEGMDIDESIPDESWVQGFMEGEYSDLSVEERLNALVALVNVAIEGNLIRVTLEDRLEAANALKKQMWAEAQLGKRRIKEDYFVKMHPVSNFSNKSESNSAFPSLEGKQKPFLSVDNKNDEALLTPLGRCNQINELLENPNHIESSSFEVSHQLHRSSANQDNYSFQQFGFAPEKSRSNIKSYIGYLAEQTYMYRTLPLGLDRRHNRYWQFIXSASPNDPGCGRIFVELHDGCWKLIDSEKGFDSLLGSLDVRGIRESHLHMMLQSXEMAFKESIRRNVHNGDARMENGDTVKRLKTEAFEVDTNNYCSDIHHPTSVCIDNSDASXVSTSFAVQLGRNEAENRDALLRYQDFEKWMLNECLNSSILCALKFGKRRRSKLLTVCDSCHDVYFFDRIKCPSCNRTLNAHGKAKIDTDYFHVSSYLPLRMRLLKVLLSIVEVSVPEEAFHGIWTNSYRKSWCTKLDACSSTEDLLEILTVLESAIKREYLDSNYETTSELLGSFSSSGCPPTNDFVGAERILPWVPCTTAAVALRLMELDACTSYTFQQKMESEKDKRIGIVMKLPTKYASAKSSCRDSAIEERGQTSQQGQRSQQGQSMHKVKHTVENMVGLGAGLASYSRGQRSRQGWSHSCVSGRSQGRILSSRHDSRKRSTTSSSMKIGNLLGWKGRPCRHAEQNVRGRRSVRSRQKPAVKVCVTGVEKDTPDDITGYTAGIFINEKMNGSEVEAAARSVSSSEKSAYENDIYQSTVDAYEYLIDDNNNDGYEGGFSGKSENFVEGSNRNVDDDENEDVDDNDDEDGQVDVEDYISHKSDTDAGENADQNMDPNGTDST* 1767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0507 1766 MobiDBLite consensus disorder prediction 76 97 - -
Amo03g0507 1766 CDD homeodomain 21 78 IPR001356 GO:0003677
Amo03g0507 1766 SUPERFAMILY Homeodomain-like 19 77 IPR009057 -
Amo03g0507 1766 MobiDBLite consensus disorder prediction 1738 1752 - -
Amo03g0507 1766 MobiDBLite consensus disorder prediction 1692 1766 - -
Amo03g0507 1766 Pfam DDT domain 556 610 IPR018501 -
Amo03g0507 1766 ProSiteProfiles 'Homeobox' domain profile. 18 78 IPR001356 GO:0003677
Amo03g0507 1766 MobiDBLite consensus disorder prediction 76 91 - -
Amo03g0507 1766 Coils Coil 397 474 - -
Amo03g0507 1766 SMART testlast3 554 613 IPR018501 -
Amo03g0507 1766 ProSiteProfiles DDT domain profile. 554 613 IPR018501 -
Amo03g0507 1766 MobiDBLite consensus disorder prediction 1561 1592 - -
Amo03g0507 1766 ProSiteProfiles HARE-type HTH domain profile. 735 804 IPR007759 GO:0006355
Amo03g0507 1766 Pfam HB1, ASXL, restriction endonuclease HTH domain 735 802 IPR007759 GO:0006355
Amo03g0507 1766 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1131 1202 IPR028941 -
Amo03g0507 1766 MobiDBLite consensus disorder prediction 1718 1737 - -
Amo03g0507 1766 MobiDBLite consensus disorder prediction 1514 1536 - -
Amo03g0507 1766 MobiDBLite consensus disorder prediction 1509 1541 - -
Amo03g0507 1766 MobiDBLite consensus disorder prediction 1561 1576 - -
Amo03g0507 1766 Pfam Homeodomain 23 77 IPR001356 GO:0003677
Amo03g0507 1766 MobiDBLite consensus disorder prediction 268 292 - -
Amo03g0507 1766 MobiDBLite consensus disorder prediction 268 282 - -
Amo03g0507 1766 SMART HOX_1 20 82 IPR001356 GO:0003677
Amo03g0507 1766 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 7 1762 - -
Amo03g0507 1766 Gene3D - 11 91 - -
Amo03g0507 1766 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 7 1762 IPR044977 GO:0006357
Amo03g0507 1766 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 948 986 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0507 Amo-Chr3 9513627 9526962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0507 1 1490 Homeobox Transcription Factor Family AT5G44180 47.919 0.0 1256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Amo03g0507 WSD 5.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0507 - - gmx:100797480 2023.44