Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0492 ATGGAATCCAATGGTGTAGACCATGCTTCCAAATTGCTTGAATCTCAAAGCCATGTATGGAACCACATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAATTGACTTAGGAATTCCAGATGCCATACACAACCATGGCCAACCCATGCCACTCTCAAAACTCATTTCTTCTCTACAAATCCATCCCAACAAAACACAATCCATCCATCGCTTGATGCGAATTTTGACTCATTCTGGCTTTTTCTCTAAACAAATCTCTTCCAAAGGCGATCCAGAATCGAGTTATTCCCTAACCGATGCATCTAAGTTGTTGCTCAAAGACAATCCTATGAGTCTTTTTCCTTTCTTGTCTGCCATGCTTGATCCCATTTTAACAAAACCGTGGTACGATTTACCGGCATGGTTCAAAAACGATAGTCCCACATCGTTTTACATGAGGCATGGGATGGCACTTTGGGAATATGCTGGTATTGAGCCAAGACTCAATAAGTTCTTCAATGATGCCATGGAAACCGATACTCCATTTGTTTCAAGTATTTTGTTTGACAAGTGTAAGGGTGTGTTTGAAGGGTTGGATTCTTTGGTTGATGTGGGTGGAGGCACAGGAACTATGACTAAGGCTCTTGCTAAGGCGTTTCCACAAATAGAGTGTGTTGTGTTTGATCTTCCACATGTTGTTCATGGCTTGCAAGGAACTGGGAATCTCAAATATGTTGGAGGTGATATGTTTGACTCAATTCCTCCTTCAGATGCCATTTTCTTGAAGTTTATATTGCATGACTGGAATGATGAGAAATGTATCAAAATACTGAAGAACTGCAAAGAAGCAATCACAAGAAGCAAAGGAAGAAAAGGAAAAGTTATTGTCATTGATATGGTAGTGGATGATGAAAAGAGTGATGGAGATAATAAATCAATTGAAACCCAACTTTTCTTTGATATGTTGATGATGGTAGAAGTCAACGGAAAAGAGAGAAATGAAAAAGAATGGGCAAACTTAATTTTCTCAGCTGTATATATATATAGCACTAGATGA 1041 0.389 MESNGVDHASKLLESQSHVWNHIFSFINSMSLKCAIDLGIPDAIHNHGQPMPLSKLISSLQIHPNKTQSIHRLMRILTHSGFFSKQISSKGDPESSYSLTDASKLLLKDNPMSLFPFLSAMLDPILTKPWYDLPAWFKNDSPTSFYMRHGMALWEYAGIEPRLNKFFNDAMETDTPFVSSILFDKCKGVFEGLDSLVDVGGGTGTMTKALAKAFPQIECVVFDLPHVVHGLQGTGNLKYVGGDMFDSIPPSDAIFLKFILHDWNDEKCIKILKNCKEAITRSKGRKGKVIVIDMVVDDEKSDGDNKSIETQLFFDMLMMVEVNGKERNEKEWANLIFSAVYIYSTR* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0492 346 Gene3D - 2 106 IPR036388 -
Amo03g0492 346 PANTHER ORCINOL O-METHYLTRANSFERASE 5 341 - -
Amo03g0492 346 CDD AdoMet_MTases 196 292 - -
Amo03g0492 346 PANTHER O-METHYLTRANSFERASE 5 341 IPR016461 GO:0008168
Amo03g0492 346 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Amo03g0492 346 PIRSF O-mtase 1 343 IPR016461 GO:0008168
Amo03g0492 346 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 346 IPR016461 GO:0008168
Amo03g0492 346 Pfam O-methyltransferase domain 130 339 IPR001077 GO:0008171
Amo03g0492 346 Gene3D Vaccinia Virus protein VP39 107 344 IPR029063 -
Amo03g0492 346 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Amo03g0492 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 339 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0492 Amo-Chr3 9214957 9217360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0492 30 335 Monolignol Biosynthesis Gene Families AT5G54160 34.295 1.06e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0492 - K16040 gmx:100781008 485.723