Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0490 ATGGAATCCAATGATGGTGAGGATCATTCTCAAAAATTGCTTTTAGCTCAAACCCACATATGGAATCACTTTTTTAGCTTCATAAATTCTATGTCCCTTAAGTGTGCAATTGAACTGAACATACTTGATGTTGTTCACAATTATGGCCAACCCATGCCACTCTCAGAACTCATTGCTTCATTACCAATCCAACCGTCAAAAGCCGCCTTCGTCCCCCGCTTGATGCGAATCTTGACACTTTCCGGCTTCTTCTCGAATCAAAATGATGATGATCAACAAGAAGAGAGGTATGTTCTAACTAATTCATCTAGACTATTGCTTAAGGATCACCCCTTTTGTATGACACCATTCTTGGATGTACTTCTTGATCCAAATTTGGTAAAACCATGGTACCAACTCTCTAATTGGTTCAAGAAATGTGACAGTAACAAGTCACCATTAGAAATGGAACATGGGAGGGCATTTTGGGAATTTGCTAGTCATGACCAAAAGCTTGGTAATAGTTTCCATGAGGCCATGACAAGCGACTCTAGATTGATTGCTAGTGTGGTGATTGAGAAGTGTAAGGATACTTTTGAAGGGTTGGAATCTTTGGTTGATGTTGGTGGGGGCAACGGAACTATGGCTAAGGCCATAGCTAAATCATTCCCAAATGTGGAGTGCATTGTGTTTGATCTTCCACATGTTGTTGCTGGCTTTCAAGGAAGTAGTGACAACAAGAACATGAAATATGTTGGAGGGGACATGTTTGAGGCAATTCCTTCTGCAGATTCTGTTTTGTTGAAGTGCATATTACACAACTGGAGTGATGAGGATTGTGTAAAACTCCTGAAGAAATGCAAGGAGGCAATAATGAAGAAGGGCAAAAAAGGAAAAGTGATAATAATAGACATGGTGGTAGGGAATGAGAATGGAGATAATGGATCACTGGAGACACAACTTTATTATGATATGGCGATGATGGCCTTTGTCACCGGAAAGGAGAGAACCGAGAAAGAATGGGCCAAGCTATTTTTCTCTTCTGGTTTCAGTAATTACAAGATAATTCCAATTTTGATGAGTTCAAGGTCTTTGATCGAGGTTTATCCATAG 1092 0.4002 MESNDGEDHSQKLLLAQTHIWNHFFSFINSMSLKCAIELNILDVVHNYGQPMPLSELIASLPIQPSKAAFVPRLMRILTLSGFFSNQNDDDQQEERYVLTNSSRLLLKDHPFCMTPFLDVLLDPNLVKPWYQLSNWFKKCDSNKSPLEMEHGRAFWEFASHDQKLGNSFHEAMTSDSRLIASVVIEKCKDTFEGLESLVDVGGGNGTMAKAIAKSFPNVECIVFDLPHVVAGFQGSSDNKNMKYVGGDMFEAIPSADSVLLKCILHNWSDEDCVKLLKKCKEAIMKKGKKGKVIIIDMVVGNENGDNGSLETQLYYDMAMMAFVTGKERTEKEWAKLFFSSGFSNYKIIPILMSSRSLIEVYP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0490 363 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Amo03g0490 363 Pfam O-methyltransferase domain 130 344 IPR001077 GO:0008171
Amo03g0490 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 363 IPR016461 GO:0008168
Amo03g0490 363 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Amo03g0490 363 Gene3D - 2 106 IPR036388 -
Amo03g0490 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Amo03g0490 363 Gene3D Vaccinia Virus protein VP39 108 363 IPR029063 -
Amo03g0490 363 PANTHER O-METHYLTRANSFERASE 6 363 IPR016461 GO:0008168
Amo03g0490 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 361 IPR029063 -
Amo03g0490 363 PANTHER ORCINOL O-METHYLTRANSFERASE 6 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0490 Amo-Chr3 9185364 9187792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0490 31 349 Monolignol Biosynthesis Gene Families AT5G54160 32.923 7.63e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0490 - K16040 gmx:100807238 457.603