Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0485 ATGGCATTTGTGATAAATTTGAACACGCAGCCGTCGTCAGAAGAAATTCACTCATTTGATACCCATATTGATATGAACGATACAAATATTTGTAATAGTTCAAGCAATTCTGCTACAGAAACCGAGTGCACGAATGAGGTCCTAATTCATCCCACCATTTCTGATGAGGAGATTCCAAAAGTGGGGATGCTATTTGGAACCCTCAAAGAAGCACGTCAATTTTACTACAACTATGCCAATAAAGTGGGATTTGAGCCTCATATAAGAAACACTAACTTCGACAAGAATGGAAGGACACCCATTAACCAATCCATACAGTGCAATAGAGATGGAAACCGAACAAAGAAGAATCTGGTAACCCAAAGGTCAAACACAGTCTCATCTGTACACTGTAAAGCTCACATCTATGTAGAATTGGCTCACACGCATCGGTGTGATCCCACTTTGTCATGGATGTTCAAGAAAAACAGAGAACTCTCCATGCACGTTATGGATGTCATTGAGCGCAACGACCAGGCTGATATATATCATATTCGTAATATATGGGTCCCTAGCATGCATGCTTTCTTTGATAAGTACCTAACGTGTAGGAGCAGTTTAATTCAATTTGTACACCAGTATGACAATTGTCTTGCAGACAAGGAACAGCAGGAGTTGGAATGCGATGCAGCAGATAATAGGGGCCTGATCCCATGTGTATCGAACTCTCCTATTGAGAAGCAGTTCCAATATGAGTACACGAACTGCATATTTCGCGATGTTCAAGCCGAATTTGTCAAAACGTGCGACTGCAACCTGTCTCCAAGGGTAGTGAAGGACAACCAATACTTCTATGAAGTGACTCAACAGAAGATAGTTAAGGGGATGTCTATTTGCAGTGAGTATGAGGTTGTGTTTTGTCCTATCTCGCACCAGGTTAGGTGCAACTGCTTCAGGTTTGAGTCATATGGTATTCTCTGTTGCCACATCCTATCGGTTTTATCCCATTGTAGGGTTGACAAGGTGAACTCGTCGTATATACTTTCTCGGTGGAGCAAGAATGTTTATCGTAAGCACACTCATATCAGAAGTAGTCACGACTCACGGCGCTCTGATGAAAGCATGAATATATTTAGGGGACTGTGTGTTGACTTCTACAATGTGGCCCAGGACTTTGTGCATGACAAGGAGGAGGCTGATATATTGCGTTCCACTTTTGCAAGTGCTAAAGTGGCACTTAGCGAACATCGGGCAAAACATGCAGAAAGCATGCGCACAAGTGAGTATCCTGATGGATTAAATGCTTTGCGGAGCCCTCCTCATGTGGTACCTAGGGGGCATCCAAGCTTCAAGAGACTGGAGGCGGATGTGGACCGGAAAATTAAGAATGGTACTAAGAGACGTCGAGCTAGTAGTAAACATACAAAGGTTAGTTATGACGGCCAGGGCTTGGACAATTATCTTGCTCTGGTTATATTTTTCATGTGTGGAGCCTGTTGA 1479 0.43 MAFVINLNTQPSSEEIHSFDTHIDMNDTNICNSSSNSATETECTNEVLIHPTISDEEIPKVGMLFGTLKEARQFYYNYANKVGFEPHIRNTNFDKNGRTPINQSIQCNRDGNRTKKNLVTQRSNTVSSVHCKAHIYVELAHTHRCDPTLSWMFKKNRELSMHVMDVIERNDQADIYHIRNIWVPSMHAFFDKYLTCRSSLIQFVHQYDNCLADKEQQELECDAADNRGLIPCVSNSPIEKQFQYEYTNCIFRDVQAEFVKTCDCNLSPRVVKDNQYFYEVTQQKIVKGMSICSEYEVVFCPISHQVRCNCFRFESYGILCCHILSVLSHCRVDKVNSSYILSRWSKNVYRKHTHIRSSHDSRRSDESMNIFRGLCVDFYNVAQDFVHDKEEADILRSTFASAKVALSEHRAKHAESMRTSEYPDGLNALRSPPHVVPRGHPSFKRLEADVDRKIKNGTKRRRASSKHTKVSYDGQGLDNYLALVIFFMCGAC* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0485 492 SMART 26again6 306 333 IPR006564 GO:0008270
Amo03g0485 492 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 184 370 IPR031052 GO:0006355
Amo03g0485 492 Pfam FAR1 DNA-binding domain 73 142 IPR004330 -
Amo03g0485 492 ProSiteProfiles Zinc finger SWIM-type profile. 295 331 IPR007527 GO:0008270
Amo03g0485 492 PANTHER OS03G0843700 PROTEIN 35 168 - -
Amo03g0485 492 PANTHER OS03G0843700 PROTEIN 184 370 - -
Amo03g0485 492 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 168 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0485 Amo-Chr3 9016614 9019397 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g0485 FAR1 9.7e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0485 - K17604 ahf:112774709 595.504