Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0438 ATGGACTCCGTGGCCGGCGCTCCGTCGCCCACCACCTCCGCAACCGCCGCTCCTCCGCGCCCGCCTCCGACGTCGTCGTCTCCGTTCCCCGGCCGCGAAGACTGCTGGAACGAGGAAGCCACCTTCACCCTCATCGACGCCTGGGGCGACCGTTACCTTGAACTCAACCGTGGTAACCTCCGTCAGAAGCACTGGCAGGAGGTCGCCGATGCCGTCAACGAACTCCACGCCGGAGACGGCGGCGCCGTCCTAGGTGGAACGTCCACTACCACAACCAAGCGAACTCGCCGGACCGATGTTCAGTGCAAAAACCGAATCGACACGCTGAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGAATCCGGCGGCAGTTACCAGAGCCCCTGGCCTTTCTTCTCCCGCCTCGACAACCTGATCGGAGATACTTTTCCGGTCAAAAAACTCTCGCCGCCGGCTTCCGGCCGGGGAACCCCTCCCTCCGCCGCCAAACTCTCACTGCTTCCGCCGCCGGCGTGGATAGTCTCTCACCCCGTAGGTCCCCGATCCGGAACTCAGAAACGTACGGCGGCGGTTCCGACGACGGCGCCGGCTAACCGGGAAGATTCCTACTTCCGGCGGAATTTCTCAGCCTTCGCAGCCGCAGCGGCTGCTGCAGCAGAAGCCAAGAGTGGAGATTCCGATGGCTGGAGGTCCAGCAGCGACGGCGGCGATGGTGGTGGAAGACGGAGGAAGACGGGGGAAATTGAGATGAAATGCTGGGAAGTTGGGTATAGGGAACTTGCTCAGGCGATTGAGAAGTTCGGAGAGATATATGAGAGAGTTGAAGCTTCGAAGCAGAGGCAGATGGTGGAGTTGGAGAAGCAGAGGATGCAATTTGCAAAAGATTTGGAGTACCAAAGGATGCAGCTTTTCATGGAGACGCAGGTTCAGTTTCAGAAAATCAAACGCGCAAAACGCACTTCTGACAGTTTCTCATAG 984 0.5904 MDSVAGAPSPTTSATAAPPRPPPTSSSPFPGREDCWNEEATFTLIDAWGDRYLELNRGNLRQKHWQEVADAVNELHAGDGGAVLGGTSTTTTKRTRRTDVQCKNRIDTLKKKYKIEKARVSESGGSYQSPWPFFSRLDNLIGDTFPVKKLSPPASGRGTPPSAAKLSLLPPPAWIVSHPVGPRSGTQKRTAAVPTTAPANREDSYFRRNFSAFAAAAAAAAEAKSGDSDGWRSSSDGGDGGGRRRKTGEIEMKCWEVGYRELAQAIEKFGEIYERVEASKQRQMVELEKQRMQFAKDLEYQRMQLFMETQVQFQKIKRAKRTSDSFS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0438 327 Pfam Myb/SANT-like DNA-binding domain 33 140 IPR044822 -
Amo03g0438 327 Gene3D - 36 115 - -
Amo03g0438 327 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 17 325 IPR044823 -
Amo03g0438 327 MobiDBLite consensus disorder prediction 1 33 - -
Amo03g0438 327 MobiDBLite consensus disorder prediction 224 246 - -
Amo03g0438 327 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 17 325 - -
Amo03g0438 327 MobiDBLite consensus disorder prediction 179 200 - -
Amo03g0438 327 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0438 Amo-Chr3 8144221 8147108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0438 31 220 Trihelix Transcription Factor Family AT3G14180 42.632 6.99e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo03g0438 Myb_DNA-bind_4 1.7e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0438 - - lang:109355153 375.941