Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0423 ATGGATCGGAGCTCCTTCTCTGCCGGAACCCGGAAGGCCCAACCCAAATCCGATATATACTCTACCTTCGTCGTCCACAACGATGATGACGCCGGAGACGGCGGAACAATCCGGCGCCGGAAATCCGGAATCCCGGAGTCACAGGAGGATCTGTACGGGACAATGACTGACCGGAGCCGGCAGAGGGAGCGGTCTTCTTCTTCCGGCTTGGTTTCGCCATCGGGATCGACCTGGAAGGCTCAGAAGTCGATAAGCGGAACCGTGGTGCGTAGGACCGCCGGCGGCAGTGGTGCCGGTTCAACGATGGAGAGGGCTGTGGCGAGCATGCAGGCGGCGGGAGAATTTGGGAAGCATAGGAAAGGGAGCGGTTCCTCGCAGAACGAGGATGCGAGGCAGCAATTGATAACAACGAAGATTTCGGCGAGTTCGATCCCGGAGAGTGTTACCAGAGAGGATCCTACAACCAAGTATGAATTGCTCAATGAACTTGGGAAGGGATCCTATGGAGCTGTTTACAAAGCAAGGGATTTAAGGACATCGGAGATGGTTGCTATCAAAGTCATATCATTATCTGAAGGGGAGGAGGGATATGAGGAAATCCGTGGTGAGATTGAGATGTTACAACAATGTAATCATCCAAATGTTGTCCGCTATCTTGGGAGCTACCAAGGAGAAGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTGATGAGCGTGACTGATGAAGCACTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGAGTACTTGCACTCAATTTTCAAAGTCCATCGAGACATTAAAGGCGGAAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTGACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCGATTGAAATGGCTGAGGGAGTTCCTCCAAGATCATCAGTGCATCCGATGAGGGTTTTATTCATGATATCCATTGAGCCAGCTCCAATGCTTGAGGATAAAGAAAAATGGTCTCTGTATTTTCATGATTTTGTTGCGAAGTGCCTGACCAAAGAGCCTCGGCTCCGCCCCACTGCATCTGAGATGTTGAAGCATAAATTCTTTGAAAAATGGAAAACTGGATCTGCTGCGGTGTTGCCAAAACTGGAAAAGGCAAGGCAAATCAGGGCATCAATGGCTTTGCAGGTGCAAACTCTTGCCCCAACTCCATTGGAAGATGAGCCCATGGCAACTTCCATGCTAAATGATGAATATGGAGATACTGTTCCATCCGGACATCAGAACCTAGCAGTGCAGGAGGCCACTGATCTTTCTTCAAGTGGTGGCGTGAGGGAAGATGATGGAGGTGAAGGAAACTTTGGAACTATGATAGTCCATGGAGATGAGGTACATAAGATCACACAGGATGGAGATTCTGCAGGTTCCTTATCTGCTTTCACGGGTGGAACAGGATTGGCCGACTCTAGGGTTGACACCCTAAAAGTTGGTACAACAAACATTGCCTCTTTTAGAGGATCTAATCCAACTACAGATACCATACAATCAACTTTACCTCGTGTTAGAAATTCAACCGAGCAGAACCTCAAAACGCAAGGTAGTTTTCGTGCACATGCTGGAATTGGTAGTGATATAAGCACTAGCATGTTGAAGAATGATACAGTCTTCCGCAAGTCATTTGCTTTACAGGACAAGCTATGGTCCATTTATGCAGCTGGTAATACAGTGCCCATTCCGTTCTTAAGGGCTACAGACATATCCCCAATTGCTCTGCTGTCAGATAATGTGCTTGGTGGCTTGCAACCAGATACCAGTGAGACTGGGGAAGTAGAATCATTGCAAGAGCTTTTTAGTGGTGATGTGCAATCCAAAAAGGGTCGGAGAGGACTAAATGAGCAGATGCCCCTTCCTCCAAGCATTTACCAGCGGCTTACATCAAGTTCCACTTTAATGAATTTGGCTCAGGCTTTAGCTTATCATAAGATGTGTTACGAAGATATGCCACTGCAGGAGTTGCAAGCAACGCAGGAGCAGCGGACAATTCAAAATCTCTCGGACACGCTTAGAACCATTCTTCGTTTGTAG 2211 0.4744 MDRSSFSAGTRKAQPKSDIYSTFVVHNDDDAGDGGTIRRRKSGIPESQEDLYGTMTDRSRQRERSSSSGLVSPSGSTWKAQKSISGTVVRRTAGGSGAGSTMERAVASMQAAGEFGKHRKGSGSSQNEDARQQLITTKISASSIPESVTREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMSVTDEALDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKWKTGSAAVLPKLEKARQIRASMALQVQTLAPTPLEDEPMATSMLNDEYGDTVPSGHQNLAVQEATDLSSSGGVREDDGGEGNFGTMIVHGDEVHKITQDGDSAGSLSAFTGGTGLADSRVDTLKVGTTNIASFRGSNPTTDTIQSTLPRVRNSTEQNLKTQGSFRAHAGIGSDISTSMLKNDTVFRKSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGLQPDTSETGEVESLQELFSGDVQSKKGRRGLNEQMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0423 736 SUPERFAMILY Protein kinase-like (PK-like) 140 430 IPR011009 -
Amo03g0423 736 MobiDBLite consensus disorder prediction 1 102 - -
Amo03g0423 736 MobiDBLite consensus disorder prediction 31 46 - -
Amo03g0423 736 ProSitePatterns Protein kinases ATP-binding region signature. 163 186 IPR017441 GO:0005524
Amo03g0423 736 Pfam Protein kinase domain 157 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0423 736 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 100 726 - -
Amo03g0423 736 MobiDBLite consensus disorder prediction 65 90 - -
Amo03g0423 736 MobiDBLite consensus disorder prediction 1 21 - -
Amo03g0423 736 ProSiteProfiles Protein kinase domain profile. 157 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0423 736 CDD STKc_MAP4K3_like 156 411 - -
Amo03g0423 736 SMART serkin_6 157 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0423 736 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 100 726 - -
Amo03g0423 736 Gene3D Transferase(Phosphotransferase) domain 1 153 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0423 Amo-Chr3 7859165 7874079 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0423 100 736 MAP Kinase Kinase Kinase Kinase AT1G69220 65.204 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Amo03g0423 Pkinase 1.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0423 - - gmx:100784666 1091.26