Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0416 ATGGAGGAGACACAAGAAGATGCAGGGCAGGCAACGCAAAGGCCATCCAGCATGTCAGCGTGGCCTTCAGATTTTGCTGGAAAATTTGGATCTGTTTCTTTGGATTCTCAAGAAACCTTAAATGATAGTGACTCACATAGACATTCTAATGAAGATGTCATGTCACCACATAAAGCATCACAGATTCTCTGGCACACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTTATTCCGGAGAAAAGACTCAAGAAATATTTCGATGATATTCCTACTTTGGATGAGCTTCAGGCTTTGAGTATAGATGGTTTTAAGGCTGATATCATTCTTGTGGACACAGAGAAAGATAGAAAGTTATCCATGTTGAAGCAACTAATTGTGACATTGGTCAAAGGATTGAACTCAAATCCAGCTGCAACGATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGACCAAATGCAGAAAGTCCCGCAAAAGCTGCACTAGAGGAGCCCTCCCATGTGTTTGAAAATTGTGGTGTCCAGTTGCTGGGGCAGATAAGGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGACACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTCCCAAATGATGAAGCTGCTGAATGTATAGACTCTTACAAGCATATGTCTGTGATGGTTGTATTAAATTCTGTGGAGCTGCTGGTTGATCTCATGCGTTTTCCTGGCCAATTGTTACCACGATCAACCAAGTCAATTTTTATGACACATATATCTGCAGCAGGAGAGAGTGATTCAGCCGAAAATGATTCTTGTGATTCACCATTGGAACCAAACAGTCCTTTGTATGGGGTTTCAGAGAGTGTTGAAAGGGAAAACTTTCAGTTCCGAAGAAAATTTGAAGGGTCTTCAAATGTGTCAGGCCTCTCCTTGAGAAATTTGATGTTACGATATCCCAGTCTTGAAAGGAAAATGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCATAGTAGGAGAAAGGTCATTGCTGAACAGAGGACTGCTAATTCAAGTCCAGAACATCAATCATTTCGAGCACACCGGCGATCCATGCTTAGCGGTGATAGGTTAGGATTTAGAGATTTTGCTGATGACCAGAGCACATCAAGATCCAGCTATAGGTCAGATGGTGCATCATCTTCACAAGYTCGCAGGATACGAAGAAGTGTCAGTGTTACTCCTGAGATTGGTGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAGCACTTAAGCAAACTCGTCGTCTAAGAGAACATGGGGATCATAGTTCTTTGTCCAATTCTCTGAATGATAGAACGAGTGGTCCAGATCTTCAGAGAAATCTGTCAAATTTCCATGGTCATGGTGACAGTTCTCAGAAAGCAATGTCATTACCGTCTTCACCGCATGACTATAGAGGACAAGCACCTGAGAGAGGTGGGCCATCTGGATATGGAGTGAATGCTAAACTGGAGTTGACTTGGAATAAAGTTCTCGAATCACAAATGTTCAACAATAAACCTCTGTTACCATTTGAAGAATGGAATATTGACTTCTCGGAATTAACCGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGCGAGGTTTTCCGTGGCATGTGGAACGGCACAAATGTTGCAATCAAGGTTTTTCTTGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTCTGCAATGAGATAAGCATTCTCAGCCGGCTGCGACATCCTAACGTTATTCTGTTTCTTGGTGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACGGAATATATGGAGGTGGGATCTTTGTATTTCTTGCTTCATATGAGTGATCAAAAGAAGAAGCTTAACTGGAAGAAAAGGTTAAAGATGTTGCGTGGCATATGCCGGGGCTTGATGCACATCCATCGTATGAAGATTATTCACCGTGATGTAAAAAGTGCAAATTGTCTTGTGGACAAGCATTGGACAGTGAAAATCTGTGATTTTGGACTCTCAAGAATAGTGACAGAGACTCCCATGAGAGATTCTTCGTCAGCCGGAACTCCAGAGTGGATGGCTCCTGAACTCATTCGAAATGAACCATTCACTGAAAAATGTGACATCTTTAGTCTTGGGGTGATAATGTGGGAGCTCTGCACCTTGAGTAGGCCTTGGGAAGGTGTACCGCCAGAGAGGGTTGTTTATGCTGTAGCTCATGAGGGTTCCAGATTGGAACTTCCTGAAGGCCCAATGGGCAGGCTGATATCAGATTGTTGGGCAGAACCGCATGAGCGACCAAGTTGCGAGGAGATCCTCTCTCGTTTGGTAGACATTGAGTACTCAATGTCTTGA 2394 0.4269 MEETQEDAGQATQRPSSMSAWPSDFAGKFGSVSLDSQETLNDSDSHRHSNEDVMSPHKASQILWHTGMLSEPIPNGFYSVIPEKRLKKYFDDIPTLDELQALSIDGFKADIILVDTEKDRKLSMLKQLIVTLVKGLNSNPAATIKKIAGLVSDFYKRPNAESPAKAALEEPSHVFENCGVQLLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPNDEAAECIDSYKHMSVMVVLNSVELLVDLMRFPGQLLPRSTKSIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESVERENFQFRRKFEGSSNVSGLSLRNLMLRYPSLERKMSLSHSEPNIATAFGRHSRRKVIAEQRTANSSPEHQSFRAHRRSMLSGDRLGFRDFADDQSTSRSSYRSDGASSSQXRRIRRSVSVTPEIGDDIVRAVRAMNEALKQTRRLREHGDHSSLSNSLNDRTSGPDLQRNLSNFHGHGDSSQKAMSLPSSPHDYRGQAPERGGPSGYGVNAKLELTWNKVLESQMFNNKPLLPFEEWNIDFSELTVGTRVGIGFFGEVFRGMWNGTNVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEVGSLYFLLHMSDQKKKLNWKKRLKMLRGICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIVTETPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYAVAHEGSRLELPEGPMGRLISDCWAEPHERPSCEEILSRLVDIEYSMS* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0416 797 Pfam Ethylene-responsive protein kinase Le-CTR1 58 252 - -
Amo03g0416 797 CDD STKc_MAP3K-like 547 789 - -
Amo03g0416 797 Gene3D Transferase(Phosphotransferase) domain 1 620 796 - -
Amo03g0416 797 Pfam Protein tyrosine and serine/threonine kinase 542 789 IPR001245 GO:0004672|GO:0006468
Amo03g0416 797 ProSitePatterns Protein kinases ATP-binding region signature. 547 568 IPR017441 GO:0005524
Amo03g0416 797 Gene3D Phosphorylase Kinase; domain 1 534 619 - -
Amo03g0416 797 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 795 - -
Amo03g0416 797 MobiDBLite consensus disorder prediction 437 504 - -
Amo03g0416 797 MobiDBLite consensus disorder prediction 40 54 - -
Amo03g0416 797 MobiDBLite consensus disorder prediction 271 290 - -
Amo03g0416 797 MobiDBLite consensus disorder prediction 389 413 - -
Amo03g0416 797 SMART serkin_6 541 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0416 797 MobiDBLite consensus disorder prediction 341 415 - -
Amo03g0416 797 MobiDBLite consensus disorder prediction 437 451 - -
Amo03g0416 797 MobiDBLite consensus disorder prediction 367 388 - -
Amo03g0416 797 SUPERFAMILY Protein kinase-like (PK-like) 516 789 IPR011009 -
Amo03g0416 797 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 26 795 - -
Amo03g0416 797 MobiDBLite consensus disorder prediction 452 485 - -
Amo03g0416 797 MobiDBLite consensus disorder prediction 1 54 - -
Amo03g0416 797 ProSiteProfiles Protein kinase domain profile. 541 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0416 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0416 Amo-Chr3 7681234 7697658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0416 1 796 MAP Kinase Kinase Kinase AT3G58640 67.073 0.0 1104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Amo03g0416 PK_Tyr_Ser-Thr 7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0416 - - gmx:100806527 1291.17