Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0401 ATGTCTTCGTCCTCATCATCAATAATCTTCACTCCCAAAACCCTTATTCTCCTAATCAATACTCTTCTTCTTCTTCTTCTTGTCCAAACATGTCATGGAGCCGCCAATGACAACCCTCCTCTGTTCCATTTCTGTTCCAACACTGGAAACTACACACCCTACACCCCCTACGAATCAAACCTGAAAATTCTCATCAACTCACTCATCTACAAAACCCCTTCAACGGGTTTTGGCCAATTCCAGAACCAACAAGCCTACGGCCTCGCCCTCTGCCGCGGCGACGCCTCCGTTGGAGACTGCAAAACTTGTGTCACCGATGCAGCCAAAGAACTCCGCAGTCTCTGTCCGTACAACAAAGGTGCCATGATATGGTGCGATAACTGCGAGGTCAAGTACTCGGACACAGATTTCTTTGGACAAGTTGATAACACTAATAGGTTCTATTTGTTGAACGTGCAAAACGTGAGTGATGCTGCAACATTCAACTATGTGGTTAAGGAGTTGTTGAGTTTGCTTGCTTCTAAGGCTTCTGAGGATCCTAAACTGTATGCTAGCGGAGACTTGAAGGTTGGAGAGTGTGAGAGAGTTTATGGGTTGGCTCAGTGCACCAGAGACCTTTCTAGCGTTGACTGCAACAACTGTCTTCATGACGCAATTCGCCAGCTTCCCAGTTGCTGTCATGGCAAACAAGGTGGTAGAGTTGTTGGTGGAAGCTGCAACATCAGATATGAGATCTACCCATTTCTCAATAAAGCTTAG 759 0.4625 MSSSSSSIIFTPKTLILLINTLLLLLLVQTCHGAANDNPPLFHFCSNTGNYTPYTPYESNLKILINSLIYKTPSTGFGQFQNQQAYGLALCRGDASVGDCKTCVTDAAKELRSLCPYNKGAMIWCDNCEVKYSDTDFFGQVDNTNRFYLLNVQNVSDAATFNYVVKELLSLLASKASEDPKLYASGDLKVGECERVYGLAQCTRDLSSVDCNNCLHDAIRQLPSCCHGKQGGRVVGGSCNIRYEIYPFLNKA* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0401 252 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 25 250 - -
Amo03g0401 252 Pfam Salt stress response/antifungal 45 134 IPR002902 -
Amo03g0401 252 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Amo03g0401 252 ProSiteProfiles Gnk2-homologous domain profile. 39 137 IPR002902 -
Amo03g0401 252 Gene3D - 143 248 IPR038408 -
Amo03g0401 252 Gene3D - 39 137 IPR038408 -
Amo03g0401 252 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Amo03g0401 252 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 25 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0401 Amo-Chr3 7450718 7451476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0401 17 249 Pollen Coat Proteome AT4G20670 38.492 6.03e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0401 - - aip:107610339 445.277