Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0399 ATGCTCAGTCAGTGTTTGGTTGATTGGCTTTGCTCACTGATTAAGGTTCAGTGTTGGCTTCAACTTTCAAATGGGAATTGGGAGCTGGTGAAGATAATAACATCTTCTGGAACTGAGTCTGTTGTTTCACAGCCTGATGGGAAAGTTTTAATGCACGATGAAAGCTTAATATCAGCAAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAACGAACCTTCAGTCTTATACAACTTACAATATAGATACAACCAGAATATGATCTATAACCTTGGTTCTCAGTTCTTGAGCACATCGATATACTCCTTTAGGAACAAAGACTTGCTGTTTGGTGGATTTCTTTTTCAGAGTCACTGCGAGGGAATACTTCTTTGGGTTGCGAATCTCAAGAACAGCTCCTGTCGCTCTCTAAAGTCTCAACTTTGGTGCTTATGGAATACTAATCTTAACAAAATTCATAACGCTCTGAATGTTCGGGCCTTGTGTTCTCCATCTGAAGGAAATGACATGCGTATTCTACTGAATCGGGAAAAAGAGAAGACAATGGCTTTGGTTGATGTTATCATTTCTTGCACCGATTCCCTCAAACAGATATCAGAGCATGTGGAAGATGCTATTGTTTATTTAGATGCTGGTTCTACAGAGAGTTTCCAGTTTATAGGGGCATATCCTATACTTCTTGATCTTGGAGCACAAGCTATTTGCAGTTTGGAAAGTATGTCAGTACTTGATGCGGTGGCTGATTGGAACTCACATTCTAATCCTGCGGGGAAATTTGTGGTTATTACATCACGCCTATTAAGTGATGCACATCGGTATATTTTACGTTGCCTGAGTGCACATCAAGTTGTTCGTCACTGCGTTATATTTACATCTATCTCAGAGGCAGCTCATTCGGTGTTTCCGGATTCACCTCTGGGACCAGATGCCTATCGTGAATATGAATCCTTATTGGTTCAAGATTATGAAGAACTAAATAAGAAATCTGGGGCAAAACCTAGGCAGTTTGGTAGTAAAGTCCAGGCAAAGATTAAATTTGAAGACGGAGGACGTTCAAAACTTTCTCCCAGTGGAGAGGATGTTCCTCATCTTGAAGCTAGTTCAAGTGGAAGAGATTTTTTTGAACAGACTCCATTGGACTCCACTGAAGATGCAGTGTTTAAATTGGATGTTTCTGTTCATCATTTTCCAATGATTTTATGTCCCTTATCACCAAGAGTATTTGTTCTACCTTCAGAAGGATTGGTGGCTGAAGCACACTTATCATCTGAGCATGAGGATTCCATTGGTCCTGGTTTTCCTCCCTTAAGTACTGGTATGCTTTCTGATACAGATGATGTGCCTCCAGGTGCAACTCTCACAGCACACTTTCTCTACCATTTGGCGGCCAAGATGGACTTGAAAATGGAAATTTTCTCCCTTGGGGATATGTCAAAAACTGTTGGAAAAATTTTGACTGACATGTCAAGTCTTTACGATGTAGGCCGCCGTAAACGGTCAGCAGGACTGTTACTCATTGATCGCACACTTGATCTCCTTACTCCTTGCTGTCATGGTGACTCACTATTTGACCGTATGTTCTCTTCTTTGCCCCGAAGGAATCGAATTTCCAATACCCAAGGTAAAGGTTCAGGGCTCCAGCTCAAACTTGGTTCTTCGTACCTGCAACGTGCTCCTTTAGATGCTCAGATACCACTTACAAAGATCCTTAATGATGAAGATTGGCAAATAAACAACTTTCGGCTTTTAGAAAGTGTTGAAGCTTTTCTATGTGGTTGGAACTCTGGTGATTCTGATTCTCAGGTTACAGGTTTGATTAATCTTAGTCAGAAAATTCATGAAAAAGAGAGTCACTCTAGTGCAGAAATACTCATTGGATCTTTTGTTTCCTCTGAAACTTTCCGTGGAACCCCATTCTTGGAAGCTATACTGGATAGAAGAACAAAAGATGGGGGCTTACTAGTAAAGAAATGGCTACAAGAAACTCTGCGCAGGGAAAACATTACTGTAAATGTGAAATCCCGTGCTGGTTTTGTTACAAAACCTGAGCTACAAGCTATGATCAAAGCATTGACTGGGAGCCAATCATCTTTGCTGAAGAATAAAGCAATTATCCAAATTGCTTCAGCCACATTGTTTGCACTTGAAGAATCAAATTGTACCAAGTGGGATGCATTTAGCAGTGCAGAGAAGATTCTGAGTGTGAGTTCAGGGGAAACCAGTCAAAGTCTTGCTGCTCAAATTGGTGATCTCATCAATAAGAGTGCTCTGTTGGGATCTCAAGTAAATAAAGGGAAAAGTGAGATGTCAAAAGGGTTACTTTCTTTGCAAGATGCTATTCTGTTGATGATTGTTGGATATATATTGGCCGGTGAAAATTTTCCATCATCTAGTTCTGAAGGCCCATTTTCTTGGCAGGAGGAACGCTTGTTAAAAGATGCTGTTGTAGATGCCCTTCTTGAAAATCCATCAGTTGCAAATCTCAAGTTTCTAGATGGGATAAGGGAAGAGCTTGAGAAAAATGTATGCAAGTCAAAATCGGAGAAAGATACTGAAAAACTAGACATCGATGATTTTGATGATGAGCAGTGGGGGGAATGGGGGGATGAAGATGTTGAGGATGACAGCAAAAATGAACAAGCGTATGGTGACGTGCAACTTAAGTTGGAGTTGCGCGACAGGGTGGATAACTTGTTCAAATTTCTTCATAAGTTATCCAATCTGAAAAGAAAGAATATACCACTTAGGGATGGATCATTGACCATGGAAGGCAATTTCAGTGAGGATTCCTATATGGGGAAAGGATTACTTTATAAGCTACTAACAAGGGTGCTAGGCAAGTATGACGTGCCAGGGTTAGAATATCATTCATCCACTGTAGGTCGTCTGTTCAAAAGCGGGTTTGGCAGATTTGGCCTTGGTCAGGCAAAACCAAGTCTTGCTGATCAAAATGTCATTTTGGTGTTTGTTATTGGGGGCATTAATGGAGTCGAGGTTCGTGAAGCTCAAGAGGCATTGGCTGAAAGCGGAAGACCTGACATAGAATTGCTTGTTGGTGGAACAACTCTTCTAACTCCTGAAAACATGCTTGATTTATTGCTAGGGGACTCCAGTTTCTTTTAA 3141 0.4082 MLSQCLVDWLCSLIKVQCWLQLSNGNWELVKIITSSGTESVVSQPDGKVLMHDESLISANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYNLGSQFLSTSIYSFRNKDLLFGGFLFQSHCEGILLWVANLKNSSCRSLKSQLWCLWNTNLNKIHNALNVRALCSPSEGNDMRILLNREKEKTMALVDVIISCTDSLKQISEHVEDAIVYLDAGSTESFQFIGAYPILLDLGAQAICSLESMSVLDAVADWNSHSNPAGKFVVITSRLLSDAHRYILRCLSAHQVVRHCVIFTSISEAAHSVFPDSPLGPDAYREYESLLVQDYEELNKKSGAKPRQFGSKVQAKIKFEDGGRSKLSPSGEDVPHLEASSSGRDFFEQTPLDSTEDAVFKLDVSVHHFPMILCPLSPRVFVLPSEGLVAEAHLSSEHEDSIGPGFPPLSTGMLSDTDDVPPGATLTAHFLYHLAAKMDLKMEIFSLGDMSKTVGKILTDMSSLYDVGRRKRSAGLLLIDRTLDLLTPCCHGDSLFDRMFSSLPRRNRISNTQGKGSGLQLKLGSSYLQRAPLDAQIPLTKILNDEDWQINNFRLLESVEAFLCGWNSGDSDSQVTGLINLSQKIHEKESHSSAEILIGSFVSSETFRGTPFLEAILDRRTKDGGLLVKKWLQETLRRENITVNVKSRAGFVTKPELQAMIKALTGSQSSLLKNKAIIQIASATLFALEESNCTKWDAFSSAEKILSVSSGETSQSLAAQIGDLINKSALLGSQVNKGKSEMSKGLLSLQDAILLMIVGYILAGENFPSSSSEGPFSWQEERLLKDAVVDALLENPSVANLKFLDGIREELEKNVCKSKSEKDTEKLDIDDFDDEQWGEWGDEDVEDDSKNEQAYGDVQLKLELRDRVDNLFKFLHKLSNLKRKNIPLRDGSLTMEGNFSEDSYMGKGLLYKLLTRVLGKYDVPGLEYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGVEVREAQEALAESGRPDIELLVGGTTLLTPENMLDLLLGDSSFF* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0399 1046 Gene3D - 959 1041 IPR027482 -
Amo03g0399 1046 SUPERFAMILY Sec1/munc18-like (SM) proteins 391 525 IPR036045 -
Amo03g0399 1046 MobiDBLite consensus disorder prediction 431 450 - -
Amo03g0399 1046 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 190 1045 IPR001619 GO:0016192
Amo03g0399 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 102 IPR027417 -
Amo03g0399 1046 MobiDBLite consensus disorder prediction 354 381 - -
Amo03g0399 1046 SUPERFAMILY Sec1/munc18-like (SM) proteins 662 1040 IPR036045 -
Amo03g0399 1046 Gene3D Kinesin motor domain 17 116 IPR036961 -
Amo03g0399 1046 PANTHER SEC1 FAMILY DOMAIN-CONTAINING PROTEIN MIP3 190 1045 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0399 Amo-Chr3 7392560 7400578 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0399 16 95 Myosins gene family AT1G50360 70.370 4.70e-29 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0399 - - ahf:112789909 1659.81