Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0363 ATGGCTACCTCAATTTTAAGGTCTAATAAAGTAGTTCATTCATTAGGGTTGCTGTGTGTGCTACTCTTGGTGCATGAGGGTGCTGCCTATGATTTTATAGTTGGAGGCCAAAAGGGTTGGAGTGTTCCAAGTGATTCCAATTTCAATCCTTTCAATTCATGGGCAGAAAAGAGCCGTTTTCAAATTGGAGACTCTCTAGTGTTCAACTACCAATCTGGGCAAGACTCAGTGCTGCAGGTGAAGAGCGAAGACTATGCAAGCTGCAACACAAACTCACCATATGCAAAATTTTCAGACGGGCACACAGTGTTTAAGCTCACCCAATCAGGCCCATACTTCTTCATTAGCGGCAACAAAGATAACTGCCTCAAGAACGAGAAGCTAACCGTCATTGTCATGGCCGACAGAACCAACCGCACCTCCTCCACAGCAAGTCCCACTTCTTCGCCACCTTCGCCGCAGCCGCCATCAGCGCCTTCACCGGCCCCGACCGGCCAAGAAGGGCAGTCTTCTCCTCCACCTGCAGGAACTGTGGAAACAAATCCAACACCCGCACCGTCCAGTGAAGGACATCATCCTCCTAATGCTGCCGCCTCCGCCTTCGTCAACTTTGCTGCTTCGCTTGTAGCAATATCCATGGCTTCTTCAGCTCTCATGTTTTCTCTCTAG 669 0.4933 MATSILRSNKVVHSLGLLCVLLLVHEGAAYDFIVGGQKGWSVPSDSNFNPFNSWAEKSRFQIGDSLVFNYQSGQDSVLQVKSEDYASCNTNSPYAKFSDGHTVFKLTQSGPYFFISGNKDNCLKNEKLTVIVMADRTNRTSSTASPTSSPPSPQPPSAPSPAPTGQEGQSSPPPAGTVETNPTPAPSSEGHHPPNAAASAFVNFAASLVAISMASSALMFSL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0363 222 PANTHER BLUE COPPER PROTEIN 5 214 IPR039391 GO:0009055
Amo03g0363 222 CDD OsENODL1_like 30 133 IPR041846 -
Amo03g0363 222 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Amo03g0363 222 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 214 - -
Amo03g0363 222 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Amo03g0363 222 MobiDBLite consensus disorder prediction 169 186 - -
Amo03g0363 222 MobiDBLite consensus disorder prediction 148 168 - -
Amo03g0363 222 MobiDBLite consensus disorder prediction 137 196 - -
Amo03g0363 222 Gene3D - 30 145 IPR008972 -
Amo03g0363 222 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0363 Amo-Chr3 6834955 6837363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0363 11 201 Phytocyanin Superfamily AT3G20570 52.880 6.10e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0363 - - gmx:100792916 278.485