Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0360 ATGCGAGCGGCGAGGAGGAGGTGCGGCGATACGAGGTCGACAGCGAAGGCGAGTAGTGGCTTCCCTAATTTCAATGCTAGGGTTTGTCATTTCGGTGCCGCACAGCTCTGCGGTGAGATCCTGGAAGAGGAAAGCGATGTCGCTGCTGCGAAATTGGGAGAAATCGAGGAGGAACCCTTGGCATCTCCTTCCCCGGCGAGGTCCGAAAAATTAAAACGATCGGGTGGTTCTGGCATGCAAATCGAGGGAGTGAGAGGCTACATGTCGCCGGAATTTCAGGCCACCGGTGTGGCGACACAGAAGTCTGACGTGTACGCGTTCAGAGTGGTCATGCTGGAGCTTCTCTCCGGGGAGGAGCCGCTGAGGTTCAGGTACGACAAGAAGAGTGGAGAGTTCGTGAGGACATCTGTGATCGACGTTGCGAGGGCGGCAGGGGACGGTGGTTAG 447 0.5727 MRAARRRCGDTRSTAKASSGFPNFNARVCHFGAAQLCGEILEEESDVAAAKLGEIEEEPLASPSPARSEKLKRSGGSGMQIEGVRGYMSPEFQATGVATQKSDVYAFRVVMLELLSGEEPLRFRYDKKSGEFVRTSVIDVARAAGDGG* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0360 148 PANTHER OS09G0572100 PROTEIN 22 144 - -
Amo03g0360 148 SUPERFAMILY Protein kinase-like (PK-like) 23 122 IPR011009 -
Amo03g0360 148 Gene3D Transferase(Phosphotransferase) domain 1 16 142 - -
Amo03g0360 148 Pfam Protein tyrosine and serine/threonine kinase 86 122 IPR001245 GO:0004672|GO:0006468
Amo03g0360 148 ProSiteProfiles Protein kinase domain profile. 1 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0360 148 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 22 144 - -
Amo03g0360 148 MobiDBLite consensus disorder prediction 55 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0360 Amo-Chr3 6651112 6651558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0360 81 133 Receptor kinase-like Gene Family AT1G21230 47.170 1.19e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo03g0360 PK_Tyr_Ser-Thr 6.9e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0360 - - adu:107478143 288.5