Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0330 ATGCTAATAGACAAAGGGCAAGAACAAGTTGGAGGTGAAACAATGGTGGGGACTCCCATTAATGGAAGATCAAGGCAAGCTTTTTCACTTGTGAATGGTGTTGGTGGTGGCCATGATCTTACTCCTGGTAGTGCTCCACCAAGCAATGCTGGATCAGACTATGGCATAATAGAGTTCACAAGAGAGGATGTGGAAGCACTCTTAAATGAGAAAGCCAAAAGGAAAGACAGATTCAATTATAAGGAAAGATGTGAAAATATGATTGATTATATAAAAAGGCTTAAGGTTTGCATAAGATGGTTCCAAGACATTGAGATGAGCTACTCACTGGAACAGGAGAGGTTGAAGAACTCATTGGAACTAACACAGCAAAAATGCATGGAAATTGAGTTGCTGCTAAAAATCAAGGAAGACGAACTGAACTCAATTATCACAGAAATGAGACGGAACTGCACTAATTTACAAGAAAAGTTGATCAAGGAAGAAACAGAAAGGGCGGCTGCAGCTGAATCTCTTGAGAAAGAGCGGGAGTCCAGGATTAACATCGAGAGGTCACATACCACTTTGTCTGAGGACCTTGGGAGAGCACAAAGAGAGATCCAAAGTGCAAATCAGAAGATATCGTCGCTCAACGAGATGTATAAGCGGTTACAGGATTACATAACAAGCTTACAACAGTATAATGGAAAACTTCATACAGAGCTTTCAACAGTTGAAGATGAACTTAAACGCGTTGAGAAAGAAAAGGCTACTGTGGTGGAGAATATCACCATGTTAAGGGGTCAACTTACATTGTCCATTGCTTCTCAAGAAGAGGCTGTAAAACAGAAGGATGTTCTAGCTAGTGAAGTTGCTTCTCTTAGAGGAGAGTTGCAACAAGTAAGAGAAGAACGAGACCGACAACTGTCTCAAGTGCAAATGCTGAGTTCTGAATTAGAGAAAGTTAAAGAATCTACTGAAAACTCATCTTCTGAACTGGACAAGTTGACTTTAAAAGCGAATGAACTAGAGGCAAAATGTTCTTTGAAAGATATGCAGATAAAGGAATTGCATGAGCAGCTAGCAACTGCAGAGAAGAAACTGCAGGTGTCTGATATATCAGTAATTGAGACAAGGACTGAATATGAAGGGCAACAGAAATTCGTAAATGAGTTACAACAACGCTTAGTGGATGCAGAATATAAACTTATAGAAGGGGAGATGCTGCGGAAAAAATTACACAATACCATTTTGGAATTAAAAGGGAACATTCGTGTTTTCTGTCGAGTGAGGCCATTGTTGCCCGATGAAAGTTGTAGTTCAGAAGGCAAGATCTTCAGTTATCCAACATCAATGGAAGCTTGTGGAAGAGGCATTGACCTAGCTCAAAATGGCCAAAAACATTCTTTCACCTTTGATAAAGTTTTTGCACCAGAGGCATCACAAGAAGAAGTTTTCGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAAACAGGATCAGGGAAAACCTATACAATGATGGGCAGGCCTGGACATCCTGAAGAAAAGGGCTTGATACCTCGTTCATTAGAACAAATATTTCAAACAAAACAGTCTCAGCAGCCTCAAGGCTGGAAATATGAAATGCAGGTGTCGATGTTGGAAATATACAACGAAACAATTCGTGATCTGCTATCTACAACACGCCAAGAGAATGGTACTCCTGGAAAACAGTATACAATTAAACATGATACAAGTGGAAATACACATGTTTCTGATCTCACAGTAGTCGATGTTCAGAGTGCTAGAGAGGTTGCATTTCTATTGAACCAAGCCGCAAATAGCAGGTCGGTGGGAAAGACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACCCTTAGAATATATGGTGTAAATGAGAGCACTGAACAACAAGTGCAAGGTGTTCTGAATCTTATTGATCTTGCTGGTAGTGAGCGTCTATCAAAGAGTGGCTCAACTGGGGATAGGTTAAAAGAAACTCAGGCAATCAACAAAAGTTTGTCGTCTTTGAGTGATGTAATATTTGCCTTGGCAAAGAAGGAGGATCACGTGCCTTTCAGGAACTCAAAGCTTACTTATCTACTTCAGCCATGTCTAGGAGGAGACTCAAAGACACTAATGTTTGTGAACATCTCACCAGACCCATCTTCACTTGGTGAGTCACTTTGCTCGCTCAGGTTTGCTTCCAGAGTCAATGCATGTGAGATTGGAACTCCTCGCCGCCAAACCAATGGAAAATCCACTGAATCTCGATTGAGCTACTTCTAA 2313 0.406 MLIDKGQEQVGGETMVGTPINGRSRQAFSLVNGVGGGHDLTPGSAPPSNAGSDYGIIEFTREDVEALLNEKAKRKDRFNYKERCENMIDYIKRLKVCIRWFQDIEMSYSLEQERLKNSLELTQQKCMEIELLLKIKEDELNSIITEMRRNCTNLQEKLIKEETERAAAAESLEKERESRINIERSHTTLSEDLGRAQREIQSANQKISSLNEMYKRLQDYITSLQQYNGKLHTELSTVEDELKRVEKEKATVVENITMLRGQLTLSIASQEEAVKQKDVLASEVASLRGELQQVREERDRQLSQVQMLSSELEKVKESTENSSSELDKLTLKANELEAKCSLKDMQIKELHEQLATAEKKLQVSDISVIETRTEYEGQQKFVNELQQRLVDAEYKLIEGEMLRKKLHNTILELKGNIRVFCRVRPLLPDESCSSEGKIFSYPTSMEACGRGIDLAQNGQKHSFTFDKVFAPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTTRQENGTPGKQYTIKHDTSGNTHVSDLTVVDVQSAREVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSLGESLCSLRFASRVNACEIGTPRRQTNGKSTESRLSYF* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0330 770 Coils Coil 57 77 - -
Amo03g0330 770 Pfam Kinesin motor domain 422 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo03g0330 770 PANTHER KINESIN-LIKE PROTEIN 17 769 - -
Amo03g0330 770 Coils Coil 137 164 - -
Amo03g0330 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 747 IPR027417 -
Amo03g0330 770 ProSitePatterns Kinesin motor domain signature. 649 660 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo03g0330 770 Gene3D Kinesin motor domain 363 751 IPR036961 -
Amo03g0330 770 Coils Coil 277 311 - -
Amo03g0330 770 Coils Coil 319 353 - -
Amo03g0330 770 Coils Coil 186 220 - -
Amo03g0330 770 CDD KISc_C_terminal 414 751 - -
Amo03g0330 770 PRINTS Kinesin heavy chain signature 492 513 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo03g0330 770 PRINTS Kinesin heavy chain signature 619 636 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo03g0330 770 PRINTS Kinesin heavy chain signature 650 668 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo03g0330 770 PRINTS Kinesin heavy chain signature 699 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo03g0330 770 Gene3D - 126 308 - -
Amo03g0330 770 Coils Coil 228 255 - -
Amo03g0330 770 ProSiteProfiles Kinesin motor domain profile. 416 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo03g0330 770 PANTHER KINESIN-LIKE PROTEIN KLP-3 17 769 - -
Amo03g0330 770 SMART kinesin_4 414 757 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0330 Amo-Chr3 6173118 6181338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0330 153 761 Calmodulin-binding Proteins AT5G65930 32.222 7.57e-80 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0330 K10405 - gmx:100784221 1346.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2194 13 36793736 36801420 Amo03g0330 03 6173118 6181338 hybridization
Amo08g1406 08 22915000 22919504 Amo03g0330 03 6173118 6181338 PCT
Amo03g0330 03 6173118 6181338 Amo08g1406 08 22915000 22919504 PCT