Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo03g0330 | ATGCTAATAGACAAAGGGCAAGAACAAGTTGGAGGTGAAACAATGGTGGGGACTCCCATTAATGGAAGATCAAGGCAAGCTTTTTCACTTGTGAATGGTGTTGGTGGTGGCCATGATCTTACTCCTGGTAGTGCTCCACCAAGCAATGCTGGATCAGACTATGGCATAATAGAGTTCACAAGAGAGGATGTGGAAGCACTCTTAAATGAGAAAGCCAAAAGGAAAGACAGATTCAATTATAAGGAAAGATGTGAAAATATGATTGATTATATAAAAAGGCTTAAGGTTTGCATAAGATGGTTCCAAGACATTGAGATGAGCTACTCACTGGAACAGGAGAGGTTGAAGAACTCATTGGAACTAACACAGCAAAAATGCATGGAAATTGAGTTGCTGCTAAAAATCAAGGAAGACGAACTGAACTCAATTATCACAGAAATGAGACGGAACTGCACTAATTTACAAGAAAAGTTGATCAAGGAAGAAACAGAAAGGGCGGCTGCAGCTGAATCTCTTGAGAAAGAGCGGGAGTCCAGGATTAACATCGAGAGGTCACATACCACTTTGTCTGAGGACCTTGGGAGAGCACAAAGAGAGATCCAAAGTGCAAATCAGAAGATATCGTCGCTCAACGAGATGTATAAGCGGTTACAGGATTACATAACAAGCTTACAACAGTATAATGGAAAACTTCATACAGAGCTTTCAACAGTTGAAGATGAACTTAAACGCGTTGAGAAAGAAAAGGCTACTGTGGTGGAGAATATCACCATGTTAAGGGGTCAACTTACATTGTCCATTGCTTCTCAAGAAGAGGCTGTAAAACAGAAGGATGTTCTAGCTAGTGAAGTTGCTTCTCTTAGAGGAGAGTTGCAACAAGTAAGAGAAGAACGAGACCGACAACTGTCTCAAGTGCAAATGCTGAGTTCTGAATTAGAGAAAGTTAAAGAATCTACTGAAAACTCATCTTCTGAACTGGACAAGTTGACTTTAAAAGCGAATGAACTAGAGGCAAAATGTTCTTTGAAAGATATGCAGATAAAGGAATTGCATGAGCAGCTAGCAACTGCAGAGAAGAAACTGCAGGTGTCTGATATATCAGTAATTGAGACAAGGACTGAATATGAAGGGCAACAGAAATTCGTAAATGAGTTACAACAACGCTTAGTGGATGCAGAATATAAACTTATAGAAGGGGAGATGCTGCGGAAAAAATTACACAATACCATTTTGGAATTAAAAGGGAACATTCGTGTTTTCTGTCGAGTGAGGCCATTGTTGCCCGATGAAAGTTGTAGTTCAGAAGGCAAGATCTTCAGTTATCCAACATCAATGGAAGCTTGTGGAAGAGGCATTGACCTAGCTCAAAATGGCCAAAAACATTCTTTCACCTTTGATAAAGTTTTTGCACCAGAGGCATCACAAGAAGAAGTTTTCGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAAACAGGATCAGGGAAAACCTATACAATGATGGGCAGGCCTGGACATCCTGAAGAAAAGGGCTTGATACCTCGTTCATTAGAACAAATATTTCAAACAAAACAGTCTCAGCAGCCTCAAGGCTGGAAATATGAAATGCAGGTGTCGATGTTGGAAATATACAACGAAACAATTCGTGATCTGCTATCTACAACACGCCAAGAGAATGGTACTCCTGGAAAACAGTATACAATTAAACATGATACAAGTGGAAATACACATGTTTCTGATCTCACAGTAGTCGATGTTCAGAGTGCTAGAGAGGTTGCATTTCTATTGAACCAAGCCGCAAATAGCAGGTCGGTGGGAAAGACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACCCTTAGAATATATGGTGTAAATGAGAGCACTGAACAACAAGTGCAAGGTGTTCTGAATCTTATTGATCTTGCTGGTAGTGAGCGTCTATCAAAGAGTGGCTCAACTGGGGATAGGTTAAAAGAAACTCAGGCAATCAACAAAAGTTTGTCGTCTTTGAGTGATGTAATATTTGCCTTGGCAAAGAAGGAGGATCACGTGCCTTTCAGGAACTCAAAGCTTACTTATCTACTTCAGCCATGTCTAGGAGGAGACTCAAAGACACTAATGTTTGTGAACATCTCACCAGACCCATCTTCACTTGGTGAGTCACTTTGCTCGCTCAGGTTTGCTTCCAGAGTCAATGCATGTGAGATTGGAACTCCTCGCCGCCAAACCAATGGAAAATCCACTGAATCTCGATTGAGCTACTTCTAA | 2313 | 0.406 | MLIDKGQEQVGGETMVGTPINGRSRQAFSLVNGVGGGHDLTPGSAPPSNAGSDYGIIEFTREDVEALLNEKAKRKDRFNYKERCENMIDYIKRLKVCIRWFQDIEMSYSLEQERLKNSLELTQQKCMEIELLLKIKEDELNSIITEMRRNCTNLQEKLIKEETERAAAAESLEKERESRINIERSHTTLSEDLGRAQREIQSANQKISSLNEMYKRLQDYITSLQQYNGKLHTELSTVEDELKRVEKEKATVVENITMLRGQLTLSIASQEEAVKQKDVLASEVASLRGELQQVREERDRQLSQVQMLSSELEKVKESTENSSSELDKLTLKANELEAKCSLKDMQIKELHEQLATAEKKLQVSDISVIETRTEYEGQQKFVNELQQRLVDAEYKLIEGEMLRKKLHNTILELKGNIRVFCRVRPLLPDESCSSEGKIFSYPTSMEACGRGIDLAQNGQKHSFTFDKVFAPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTTRQENGTPGKQYTIKHDTSGNTHVSDLTVVDVQSAREVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSLGESLCSLRFASRVNACEIGTPRRQTNGKSTESRLSYF* | 771 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo03g0330 | 770 | Coils | Coil | 57 | 77 | - | - | |
Amo03g0330 | 770 | Pfam | Kinesin motor domain | 422 | 747 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Amo03g0330 | 770 | PANTHER | KINESIN-LIKE PROTEIN | 17 | 769 | - | - | |
Amo03g0330 | 770 | Coils | Coil | 137 | 164 | - | - | |
Amo03g0330 | 770 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 374 | 747 | IPR027417 | - | |
Amo03g0330 | 770 | ProSitePatterns | Kinesin motor domain signature. | 649 | 660 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Amo03g0330 | 770 | Gene3D | Kinesin motor domain | 363 | 751 | IPR036961 | - | |
Amo03g0330 | 770 | Coils | Coil | 277 | 311 | - | - | |
Amo03g0330 | 770 | Coils | Coil | 319 | 353 | - | - | |
Amo03g0330 | 770 | Coils | Coil | 186 | 220 | - | - | |
Amo03g0330 | 770 | CDD | KISc_C_terminal | 414 | 751 | - | - | |
Amo03g0330 | 770 | PRINTS | Kinesin heavy chain signature | 492 | 513 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Amo03g0330 | 770 | PRINTS | Kinesin heavy chain signature | 619 | 636 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Amo03g0330 | 770 | PRINTS | Kinesin heavy chain signature | 650 | 668 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Amo03g0330 | 770 | PRINTS | Kinesin heavy chain signature | 699 | 720 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Amo03g0330 | 770 | Gene3D | - | 126 | 308 | - | - | |
Amo03g0330 | 770 | Coils | Coil | 228 | 255 | - | - | |
Amo03g0330 | 770 | ProSiteProfiles | Kinesin motor domain profile. | 416 | 749 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Amo03g0330 | 770 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 17 | 769 | - | - | |
Amo03g0330 | 770 | SMART | kinesin_4 | 414 | 757 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo03g0330 | Amo-Chr3 | 6173118 | 6181338 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo03g0330 | 153 | 761 | Calmodulin-binding Proteins | AT5G65930 | 32.222 | 7.57e-80 | 277 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo03g0330 | K10405 | - | gmx:100784221 | 1346.64 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo13g2194 | 13 | 36793736 | 36801420 | Amo03g0330 | 03 | 6173118 | 6181338 | hybridization | |
Amo08g1406 | 08 | 22915000 | 22919504 | Amo03g0330 | 03 | 6173118 | 6181338 | PCT | |
Amo03g0330 | 03 | 6173118 | 6181338 | Amo08g1406 | 08 | 22915000 | 22919504 | PCT |