LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo03g0320	GAGGATCTATTCTTATGGAAACTTGCTGAGAGTGAGAATCTCAATGTCATCATTGAGAATCAAGAGAACTATAATAATAACAACAATAATAAGAATAAGGCAGAGCCAGCATCATCAACAACAATGTATGCTTGTTTAAAAAGCATATTGAATAAGCCTGAAAGAGGAGAAGACCACACAATCTTACAAGCACTTTTAAGTGTTGACATGTTTCTGATATTCTTTGTTTCAGCATGTGGGCTTGGTGCTACTTTGGCAGCAATTGACAACCTTGGACAGCTTGGTGAATCTTTAGGGTACTCAAAGATTAAAACTCAGTATTTTGTATCTCTAGTAAGTGTATGGAACTTCTTTGAGAGATTTTTTTCTGGTTTTGCATCTGAGGCATTGTTAGGACTATACAAGTTACCAAGGCCATGTTTCATAATTGGATTCTGCTTTGGTGCTCAAATTCCATTGATTTCAGTCACAATATCTGAGATTTTTGGCCTGAAATACTATGGTGCATTGCTGAATTATTGGCACCTAGGGAGCCCTATATGTTCTTATCTGATGAATGTTTTGGTTGGTGGGGCTTTATATGATGCAGAGGCTAAGAACCAACTCAAAAAAATTGATCATAGTGTTAGTTTGAATGAGGAGGTGGCAGAATTAGTATGCATTGGAATGAATTGTTATATTTTCACTTCTGTCATTTTTGCTACTATCATACTCTTTGGTGCTTTTGCTTCACTTGTTTTGGTGAAGAGAACAAGTGAGATCTATTAG	768	0.362	EDLFLWKLAESENLNVIIENQENYNNNNNNKNKAEPASSTTMYACLKSILNKPERGEDHTILQALLSVDMFLIFFVSACGLGATLAAIDNLGQLGESLGYSKIKTQYFVSLVSVWNFFERFFSGFASEALLGLYKLPRPCFIIGFCFGAQIPLISVTISEIFGLKYYGALLNYWHLGSPICSYLMNVLVGGALYDAEAKNQLKKIDHSVSLNEEVAELVCIGMNCYIFTSVIFATIILFGAFASLVLVKRTSEIY*	256

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo03g0320	255	SUPERFAMILY	MFS general substrate transporter	53	252	IPR036259	-
	Amo03g0320	255	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	18	140	-	-
	Amo03g0320	255	PANTHER	PROTEIN NUCLEAR FUSION DEFECTIVE 4	18	140	-	-
	Amo03g0320	255	PANTHER	PROTEIN NUCLEAR FUSION DEFECTIVE 4	142	255	-	-
	Amo03g0320	255	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	142	255	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo03g0320	Amo-Chr3	6066978	6067837	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo03g0320	1	255	Nodulin-like Gene Family	AT2G39210	42.123	1.75e-68	220

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo03g0320	-		-	aip:107632379	397.897