Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0305 ATGTGCTTCGGCACATTAGAAGATGCGCGTGCATATTATTACCGATATGCGAGGGTGGTTGTTAATCAAGCTTTGCATTGTAACAGAGATGGATACCGCACATCCCGTGTAAAGGCACCCCAGAGAGGGAAAACAGTGGCCTCAACAAACTGCAAAGCCCGTTGCTATTTGGCATTAGATAAAATGACAGGGCAGTGGAGAATTTCTCGAGTAGAGGTATCCCACTCACACCCGCTTAATCCAAAGCTATCTGGAATGTTCTCAGCAAACCGTCAGCTAAGTATGCATGTGAAGGACCTGATACAGCAAAATGACCAAGCTAGCATTAGACCGAGTAAGACGTACCAGGCACTAGCCAATGCAGTCGGTGGCCCTGCCAACCTCACCTTTACAGAGAAGGATGTTAGAAATTACATTAGTCATCACTTACGCATTTCCGGGGATGAGACGGATCCAAAAGAGTTACTTAAGCACTTCTCACGGATGAGGAGCTCAATCCAAACTTTTTCTTTGAAATAG 519 0.4566 MCFGTLEDARAYYYRYARVVVNQALHCNRDGYRTSRVKAPQRGKTVASTNCKARCYLALDKMTGQWRISRVEVSHSHPLNPKLSGMFSANRQLSMHVKDLIQQNDQASIRPSKTYQALANAVGGPANLTFTEKDVRNYISHHLRISGDETDPKELLKHFSRMRSSIQTFSLK* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0305 172 Pfam FAR1 DNA-binding domain 14 81 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0305 Amo-Chr3 5764028 5764606 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g0305 FAR1 1.3e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0305 - - ahf:112805526 299.286