Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0294 ATGGGTTTATCAATCTTCTTTGTATATACGTATGTTTCAGGGAAATACAGAAAACACACAAATCGAAGAGCTGATGAATTAAGTGCTGTTGAGCTTGATAATCTGATGACTGTGGTTGCCAACCCAAGGCAATTCAAGATCTCAGACTGGTTCCTCAATAGGAAGAAGGACTACAAGGATGGCAAGTACTCCCAGGTTGTGTCCAACGCCCTCGACATGAAGCTCAGGGATGACTTAGAGAGACTCAAGAAAATCATAGGTGACCATAGAGGCTATGCTCACAGTGAAAACCGTGACCATAGAAAAGACTATGATCACGATTTTTTTGTGTGA 333 0.4174 MGLSIFFVYTYVSGKYRKHTNRRADELSAVELDNLMTVVANPRQFKISDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIIGDHRGYAHSENRDHRKDYDHDFFV* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0294 110 Gene3D 30s ribosomal protein s13, domain 2 60 101 IPR027437 -
Amo03g0294 110 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 21 94 - -
Amo03g0294 110 PANTHER 40S RIBOSOMAL PROTEIN S18-RELATED 21 94 - -
Amo03g0294 110 Pfam Ribosomal protein S13/S18 20 96 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0294 Amo-Chr3 5382569 5384560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0294 5 94 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 66.337 4.05e-40 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0294 K02964 - qsu:112019340 128.642