Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0268 ATGGGCCACCAAGATTCCCAAGCACTCGTCTCTGACATGCTTGAAAATTTTTTAAAGCAAATTAAGATGTTATATGAACAAGGAGCAAGGGCATTTTGGATACATAACACGGGTCCAATTGGTTGCTTGCCATTGAGCATGCCTAAGCACAATGCAAATAATAATACTGCAGTTCAAACTTTTAATAGTTTTTGGCCTATAAAAGAAAATACAGTAGAAAACCAAAAAGAAAACGACGTTGCGGTTTCTGGTTCACTTGATGAAAACGGGTGTGTCATATATGCAAACGACATAGCTAAAGATTTCAATAGTAAGCTCAAGAATGGAGTCCTCAAATTGAGGGCACAGTATCCAGATGCCTCTTTCACATACGTGGACATGTTCTCTGCTAAGTATGAGCTCATCAGCAACTCCAAAAGAGAAGGATTTGTTGATCCTTCTGAAATTTGTTGTGGTTATCATGAGGATGGGTACCATGTAAATTGTGGGAACAAAGCCATGATTAAAGGTAAAGAAATTTATGCTGGTTCTTGTAAAGATCCGTCAAAGTACATTAGCTGGGATGGTGTGCACTACACTGAGGCAGCAAATCGATGGATTGCTAATCGCATATTAAATGGTTCATTGTCAGATCCTCCACTTCCTATAACACTCTCTTGTAAAAGGACTCCATAG 675 0.3896 MGHQDSQALVSDMLENFLKQIKMLYEQGARAFWIHNTGPIGCLPLSMPKHNANNNTAVQTFNSFWPIKENTVENQKENDVAVSGSLDENGCVIYANDIAKDFNSKLKNGVLKLRAQYPDASFTYVDMFSAKYELISNSKREGFVDPSEICCGYHEDGYHVNCGNKAMIKGKEIYAGSCKDPSKYISWDGVHYTEAANRWIANRILNGSLSDPPLPITLSCKRTP* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0268 224 Gene3D SGNH hydrolase 2 208 IPR036514 -
Amo03g0268 224 Pfam GDSL-like Lipase/Acylhydrolase 4 204 IPR001087 GO:0016788
Amo03g0268 224 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 222 - -
Amo03g0268 224 SUPERFAMILY SGNH hydrolase 113 206 - -
Amo03g0268 224 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 4 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0268 Amo-Chr3 4836239 4840565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0268 21 205 Pollen Coat Proteome AT1G75910 27.273 1.08e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0268 - - aip:107605082 419.083