Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0256 GTCACAGCCAATCCATGGGATCTTTCTAGGGTGCCAGGAGGATCATCAGGAGGATCGGCAGCTGCAGTTTCTGCCAAGCAGTGTGTGGTATCACTGGAAAGTGATACTGGTGAAAGCGTGAGACAGCCAGCATCCTTTTGCGGTGTTGTAGATTATGCTCAGTGTCTTCTTGCGTTTGTGAATTGTGACATGGGGAGCCCCATTGTGGCTCATGTCCTTATGTTGTTTGATAAAATGCCTCAACGAATCATCCAAATTAATGGCATAAAATATTTCAAAATTGACGAGGAGCAAGTAATTGATGGACTTGATAAAGCTGTGATGAACATGAAGAAAGGGGAAGTTGCATTGGTGACCATACATCCTGAGTATGCTTTTGGCTCATCTGGGTCAACTCAGGAATTGGCCACCGTTCTTCCCAACTCCAACGTGTACTATGAAGTTGAGCTGGTTTCCTTTGTAAAGGTGAGAGAGAATTGTCTTATGTTCCTAATGTTTTATGGAAAAGGAATGTGGGATCTGAATACACCAGAGAATATAGAGGCAGCTGGAAAGAAGAAGGAAGAAGGGAATACATTGTTCAAGGCTGGCAAATATGAAAGAGCATCAAAGATATATGAAAAGTTCTCTGTATCCTTCACTGTAGAGTGCAGTACAGTTGCAAGATAA 669 0.4275 VTANPWDLSRVPGGSSGGSAAAVSAKQCVVSLESDTGESVRQPASFCGVVDYAQCLLAFVNCDMGSPIVAHVLMLFDKMPQRIIQINGIKYFKIDEEQVIDGLDKAVMNMKKGEVALVTIHPEYAFGSSGSTQELATVLPNSNVYYEVELVSFVKVRENCLMFLMFYGKGMWDLNTPENIEAAGKKKEEGNTLFKAGKYERASKIYEKFSVSFTVECSTVAR* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0256 222 Pfam Amidase 2 50 IPR023631 -
Amo03g0256 222 SUPERFAMILY FKBP-like 91 162 - -
Amo03g0256 222 MobiDBLite consensus disorder prediction 1 20 - -
Amo03g0256 222 Gene3D Amidase signature (AS) domain 1 50 IPR036928 -
Amo03g0256 222 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 75 154 IPR001179 GO:0003755
Amo03g0256 222 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 92 160 - -
Amo03g0256 222 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 168 209 - -
Amo03g0256 222 Gene3D Tetratricopeptide repeat domain 169 219 IPR011990 GO:0005515
Amo03g0256 222 PANTHER PEPTIDYLPROLYL ISOMERASE 168 209 - -
Amo03g0256 222 Gene3D - 76 160 IPR046357 GO:0003755
Amo03g0256 222 PANTHER PEPTIDYLPROLYL ISOMERASE 92 160 - -
Amo03g0256 222 SUPERFAMILY Amidase signature (AS) enzymes 2 50 IPR036928 -
Amo03g0256 222 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 92 151 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0256 Amo-Chr3 4662568 4664366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0256 92 208 Calmodulin-binding Proteins AT5G48570 70.940 8.41e-47 160