Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0251 ATGAGAAACTTCAAAATGTTACTTATTTTGTTGTTTCTAGTATCCTACATGAGAGGCTCGACTTCTTTACACAGTTTAGGAATGAGTGAATGTATTCGTGATGGTGGCGAGACTTTGCTTTCAGCTGATGCAAGTTTCGAACTGGGTTTCTTCAGCCCTGGAACTTCAACAAATCGATATTTGGGTGTCTGGTACACAGATGTATCAGGAAAGCAAACAGTTGTGTGGGTGGCCAACAGAGAAACACCACTCCACAACAAGTCAGGGATCCTCATGTTAAACGAAATGGGGATTCTTCAACTTCGCACCGGGGCAAACGCTACTATTCTTTGGTCGTCCAAGGTATCAGACGAAGCCTTTAAATTGAGTAATTCGACAGCAGAGCTCTTTGATTCAGGAAATCTTGTGGTGAAAAGTGGGCAGGATGAGGGCAGCTTCTTGTGGCAGAGTTTTGATTATCCCTGTGACACTTTGATGCCGGGAATGAAGCTCGGACTAAAATCTGGCATAGATAGATATTTGTCAAGCTGGAAAAGTACAGATGACCCTGCAGTGGGAGAATATTCCATCAAAATTGATCGTAAAGGGTATCCGCAACTAGTTCAGATGAAAGGATCCTTCATTAACGCTAGAGAGGGCTCATGGAATGGCATTTATTTCACTGGATATCCGAATCTGCAACAGAGCATTTTTAAACGAGAATTTGTATTCAATGATACAGAGGTGTATTATGAGTTTGATATACTTGATAGATCAATTTTCAAAATATTTAGAGCCACCCCTTCAGGTGGTTGGGAAAACATGGTATGGACAAGTCAAACTGCCGAAACTACTACGTCCGGGGGGCAGGATGCATGCGACAGTTATGCATTCTGCGGTTCGAATTCTGTATGCAACATTGGTGATAATGTTGCGTCATGTGAATGCCTCAAAGGATATGTTCCCAAGTTTCCTCAACAATGGAATGTGTCATATTGGTCCAATGGTTGTGTTAGAAAGACTAGGAAGACTTCATCGGCGTGTAATAACACACAAGGCTTCTTGAGGTACAAAGACATGAAATTGCCGGACACATCTTCTTCATGGTTTAATAAGGCAATGAATCTTGAGGAATGTCAGAAGTCATGCTTGAAAAATTGTTCTTGTACGGCTTATGCGAATTTGGATATTCGTAATGGAGGAACTGGTTGTCTGCTTTGGTTTGATCACCTTATTGACATTCGGCAATTCTCACAAGAGGGTCAAGACCTTTACATCAAAGTCCCTAGTTCTGAGTTAGCTAATGACCATGGAAACAAGAAGATAAAGACGGTAGCAATTGCTGTTGGAGTGATTATTTTTGGATTAATCTGTTGGGTTATCATAATGCTAATTAAATATCCAGGGTTCGCAAGAAATATAAGGAAAAATAAACAAAGACAAGATGTTGATCTCCCAATATTTGATTTCTCAGTCTTAGCTAAAGCTACAGACAACTTTTCAAGCAACAAAAAACTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGCTACTATAAATGGTCAAGAACTAGCAGTTAAAAGACTTCCAAAAAAGTCTGGCCAAGGATCAGAAGAATTCAAAAATGAGGTAGTGTTAATAGCCAAGCTTCAACATCGTAATCTTGTAAAACTTCTTGGTTGTTGCATTCAGGGGGAAGAAAAAATATTGGTCTATGAATACATGCCTAACAAAAGCTTGGATCACTTTGTTTTTGATGAAACAAGAAGAAAGACAGTAGATTGGCTTAAGCGTTTCAACATTATTGGCGGCATTGCTCGAGGACTTCTTTATCTCCATCAAGATTCTAGACTAAAGATTATACATAGAGATCTTAAAACTAGTAATATTCTTTTAGATGCAAATTTAAATCCCAAAATATCAGATTTTGGCTTGGCTCGAACCTTTTTTGGTGATCAAGTTGAGGCAAATACGAATAGAGTTGCTGGAACATATGGTTATATGCCTCCTGAATATGCAGTACATGGACAATTTTCAGAGAAATCAGATGTATTTAGTTATGGTGTGATAGTATTAGAGTTGTTAAGTGCGAAACGGAATAGAGAATTCTCAGATTCCGAAAACTACCTTAATCTACTTGGACATGCATGGAGATTATGGACTGAGGATAGGCCACTGGAACTATTGGATGAAGTGATAAGGGAAAATTGCAACCATTGTGAAGCGATAAGATGCATACAAGTGGGCTTACTATGTGTGCAACAAAGACCAGAAGATAGGCCAAGTATGTCATTGGTGGTTCTAATGCTAAATGGCGAGAAAATGTTGCCCAAACCAAATTTTCCTGGATTTTACATTGATAGAGGTGTTCAACTTCAAGCAGATTCTTCATTGCCGAACAACACATTCTTTTCAGCTAACCAAATTTCGATAACAATATTAGAAGCTAGATAG 2433 0.3901 MRNFKMLLILLFLVSYMRGSTSLHSLGMSECIRDGGETLLSADASFELGFFSPGTSTNRYLGVWYTDVSGKQTVVWVANRETPLHNKSGILMLNEMGILQLRTGANATILWSSKVSDEAFKLSNSTAELFDSGNLVVKSGQDEGSFLWQSFDYPCDTLMPGMKLGLKSGIDRYLSSWKSTDDPAVGEYSIKIDRKGYPQLVQMKGSFINAREGSWNGIYFTGYPNLQQSIFKREFVFNDTEVYYEFDILDRSIFKIFRATPSGGWENMVWTSQTAETTTSGGQDACDSYAFCGSNSVCNIGDNVASCECLKGYVPKFPQQWNVSYWSNGCVRKTRKTSSACNNTQGFLRYKDMKLPDTSSSWFNKAMNLEECQKSCLKNCSCTAYANLDIRNGGTGCLLWFDHLIDIRQFSQEGQDLYIKVPSSELANDHGNKKIKTVAIAVGVIIFGLICWVIIMLIKYPGFARNIRKNKQRQDVDLPIFDFSVLAKATDNFSSNKKLGEGGFGPVYKATINGQELAVKRLPKKSGQGSEEFKNEVVLIAKLQHRNLVKLLGCCIQGEEKILVYEYMPNKSLDHFVFDETRRKTVDWLKRFNIIGGIARGLLYLHQDSRLKIIHRDLKTSNILLDANLNPKISDFGLARTFFGDQVEANTNRVAGTYGYMPPEYAVHGQFSEKSDVFSYGVIVLELLSAKRNREFSDSENYLNLLGHAWRLWTEDRPLELLDEVIRENCNHCEAIRCIQVGLLCVQQRPEDRPSMSLVVLMLNGEKMLPKPNFPGFYIDRGVQLQADSSLPNNTFFSANQISITILEAR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0251 810 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Amo03g0251 810 Pfam S-locus glycoprotein domain 211 317 IPR000858 GO:0048544
Amo03g0251 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Amo03g0251 810 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Amo03g0251 810 CDD STKc_IRAK 499 765 - -
Amo03g0251 810 Gene3D Hepatocyte Growth Factor 338 419 - -
Amo03g0251 810 SMART serkin_6 493 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0251 810 SMART blect_4 30 154 IPR001480 -
Amo03g0251 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Amo03g0251 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Amo03g0251 810 Pfam PAN-like domain 341 407 IPR003609 -
Amo03g0251 810 CDD B_lectin 35 154 IPR001480 -
Amo03g0251 810 ProSiteProfiles Protein kinase domain profile. 493 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0251 810 SUPERFAMILY Protein kinase-like (PK-like) 477 778 IPR011009 -
Amo03g0251 810 SMART ntp_6 341 421 IPR003609 -
Amo03g0251 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 807 - -
Amo03g0251 810 Gene3D - 24 151 IPR036426 -
Amo03g0251 810 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 18 807 - -
Amo03g0251 810 Pfam D-mannose binding lectin 73 178 IPR001480 -
Amo03g0251 810 Pfam Protein tyrosine and serine/threonine kinase 495 760 IPR001245 GO:0004672|GO:0006468
Amo03g0251 810 Gene3D Phosphorylase Kinase; domain 1 462 567 - -
Amo03g0251 810 Gene3D Transferase(Phosphotransferase) domain 1 568 771 - -
Amo03g0251 810 CDD PAN_AP_plant 342 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0251 Amo-Chr3 4564125 4567339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0251 481 810 Receptor kinase-like Gene Family AT4G23140 57.018 1.13e-128 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo03g0251 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0251 - - aip:107614884 1128.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2231 13 38034910 38063816 Amo03g0251 03 4564125 4567339 hybridization