LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo03g0243	TTGAGTCGTTGTTGTTCGGGTGTAGATCAGGAATTCTTGGGTCCCCTCTGTATTGATGATGACCAGTTTATTCTCAATGACTATGCCAAGGCTGCAAGTTTTTCTACAAGAGTTCGGAGCACAAATAAGAAGGGAAACGAAATTAAGAATCAATTGATTTCATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACAAATCCCATAACTGGTTTAAATTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTTGGTGTTTGGATCATTTCAAATGTCGTGTTGCATCATTCACATCCTTGCTGTCCAACTCAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATATCCGTTCGTCGTACAATAGAGAATAACGAAGAGGCTGCACACAAAGGAGCGAGAGCATGCATTCATTTTTTAACAAGCTCATTACACGGAACAGCTCGCTTATCCAATTTGTCAAATAATACGATAATTGCCTCGGAAGCAGGGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTTCATACAGTCATACCGTGTGCAACAAGATCTTCCATTAAAGCTCAATTTCAACATGTGTACACTCACCAAAAGATTGGCGAATTGCATCACAAGATTAACGAACTCCACTCTAGGCTATTCAGTATACGAAGTTGGAGAACAAGTTTTCAGCTCTCAACAAGTTTGTGGTTACTTACAACTCAGTAGCAGCCGAAATGACAATGCTTATTATTCGAGTCAAGAAGCATATTATGCCGTCACGCCTTAA	795	0.4038	LSRCCSGVDQEFLGPLCIDDDQFILNDYAKAASFSTRVRSTNKKGNEIKNQLISCSREGKWKSKISPTEKTNPITGLNCPARIYIHTLKDVGVWIISNVVLHHSHPCCPTQAEMLKQHRELSISVRRTIENNEEAAHKGARACIHFLTSSLHGTARLSNLSNNTIIASEAGSKQRENQMLQIFIQSYRVQQDLPLKLNFNMCTLTKRLANCITRLTNSTLGYSVYEVGEQVFSSQQVCGYLQLSSSRNDNAYYSSQEAYYAVTP*	265

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo03g0243	264	Pfam	FAR1 DNA-binding domain	26	108	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo03g0243	Amo-Chr3	4482488	4484461	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Amo03g0243		FAR1	4.9e-09	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo03g0243	-		-	aip:110271906	213.001