Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0206 ATGCCGGAGTGCTTGCCGAATGGGTTTGATTGTAAGAGGAAGGAAGATGAGCTGGGAGAGAAGAGAAGAAGTGATGGTTTTGGGAGCAAGAAGGTGAAGATGATGATGGATGCAGATTCACCTTATTTAGCTTCGTCTGGGAAGAGTAGAGAATTGGAGGATGATAACATTTCTTACATTATCAAAAAGTGGACTGTGGGAACTAGGTACGATACAGTCAACTTCGGGAGAGGAAGCATCTGTTTCACTCTCAAATGGAAATACGATCTCATGAAGCTCTGTTATTTGAATGAGCCATCAGTTCTTCACAATATTAAGTTCAGACATTCTCAGGACATGATTTATACTAAAGCAGGGCCCATTTTAATTGCAGTCAATCCCTTCAAAGATCTCCAGATTTTTGGAAATGATCGTATTTCAGCTTATAAGCAGAAATTTACCAATAGTCCTCATGTTTTTGCTGTGGCTGATGAGGCTTTTACGAAGATGATGAGAGATGAAGCAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCAAAGATTGCTATGCAGTACTTAGCTGCTGTTGGTCGTAGTAATAGGGGTACAGAAGAAAAAATTCTTCAAACAAATCATGTGCTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGAAAACTCTAGCAGATTTGGGAAGCTGATTGAAATTCATTTCAGCACAATGGGTAAAATCTATGGGGCTAAAGTTCAAACATGTAAGCTTGTTCAAGCTTTAGATGTTACTGCAGATTCAAGAGTTGTTCAGCTGGCCAGTGGTGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATTTGGCCTTAAAGAGAGACTTAATCTTAGAGCAGCCAGCTATTATAAATATCTTAATCAGAGTGAATGCTTGATGATTGATGGCATTGATGATGCTAAAAAATTTCATCAGCTGATGAAAGCACTCGATATTGTCCAAATTTGCAAAGAGGACCAAGAGCTGATCTTTAAGGTGCTGGCTGCTATACTATGGCTGGGAAATATATCATTCAAAGTTGCAGACAGTGAGAATGACATTGAGGTTCTGGATGATGAAGCTGTTACCAGTGCTGCTCGGCTGATGGGTTGCAGCTCCCAGGCATTGAAGGCAGCATTATCTACCAAGAAAATCCAGCCTGAGAAGGATACTAATACAAAAAAATTGATATTGCAGCAGGCAATTCAAACGAGAGACGAAATTGCAAAATTTATGTATGAAAACTTGTTTAACTGGATTGTAGACCAAATCAACAGGTCACTTCAAGTGGGTAAAAGATGTACTGGGAAATCCATAAATATCTTGGATATTACTGGTTTTGAATCATTCCAGAAAAGTAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAAAGACTTCAACAGCATCTCAATCGGCATCTGTTTAAGCAAGAGCAGGAGGACTATGAGTCAGATGGCATTGAGTGGACTAAAATATATTTTAAGGACAATCAAGAGTGCTTGGATCTCTTTGAGAGGAAACCTCACAGTCTACTCTCCTTGTTGGATGAGGAATCAAATTTGCCTAAGGCTTCTGATCTAACGTTTGCAAACAAACTTAAGCAGCACTTGAGTACTAATCCTTACTTCAAAGGGGAGAGAGGCAGGGCTTTCAGTGTTCGTCATTATGAAGGGGAGGTTCTGTATGATACGAATGGCTTTCTAGAAAAGAACAGAGATTTTATGCCTTCCGATTCCGTTCAATTCCTTGCATCATGTAAATGTGAACTGCTGCCATTGTTCTCCAAAATGTTTGATCAGTCTCTGAAGTGTTCAAATTCCTTCGGCACAGGTGCAGTGGATTCACAGGAGCAGAGTGTTTGTAAAAAGTTTAAGGGTCAATTGTTCAATTTGATTGACCAATTGGAGTGCACCACACCTCACTTCATTCGATGCATAAGGCCAAATACTAAGCAGCTGCCTGACATTTATGATGAAGACCTTGTCCTACAACAGCTCAAGTGTAGTGGGATTCTTGAGGTTGTTAGAACTTCAAGGGCTGGATATCCAACTCGAATGACTCATCAAGAGTTTTCCACAAGGTATGGGTTTCTGCTTTCTGAGGCCAACAAATATCAGGATCCATTGAGCACTTCAGTTGCCATTTTGCAACAATTTAATATCCCTTCTGAGATGTACCAATTCGGCTATACTAAGTTGTATCTTCGAGCTGGGCAGACTGGTTCACTGGAGCTCAAGAGAAAACAGGTTTTGCAAGGAATAGTTGTGGTTCAAAAATACTTCCGTGGTTATCAAGCAAGGAGTTATTTCCAGGAACTTAAGAAAGGAGTGGCAACATTACAATCATTTGTTCGTGGAGAAATTACAAGAAGGAAATTTGGTGTTATGAAGCCTTCTATAACAATTTATTCTAAAAATCTTGAGGAGATCCAAGCAATCATACAACTGCAATCTGTAATTCGTGGGTGGCTGGCTCGTAAGGATGCAAGTACTCCAAATGGTTTTAAGAGTTATCCTGAAAATGCAAAACATAGACGGAAATCACTTGTTAAGATGCTGGAAGTGAAGATGAGTCTCGTTGCTGCTAGAAAGAGCCTTGCTTCTGATAGTGGCAATACTCAACCTACAAGAAATGAAGTCCTGTCTCCTCGGTACTATGGTTCTGAAGATGCTACCCTGGGATCTCGAACAGCTGTGAACACTCCAATAAAGTTTTCTAGCAATTTCGCTGTCTCTGATGGAGGCAGAGAGGCTAACGGGATCAGAGAAAGAGGGACAAGTGGTACTTTGAGCAGTCTGATGAAGGAATTTGACCAGCGAAGGCAGAACTTCGACGACGAAGTTAAAGCTCTGAATGATGTTAAACCAGGGAACTCCACCACCACAAATTCCATTGAAGAATTTCGTAAACTTAAGCAGAGTTTTGAGGGATGGAAGAAACAATACAAGGTTAGGTTACGCGAGACAAAAGCAAAGCTTCATGAAGCAGATAAAAGTCGGAGGACATGGTGGGGGAAATTAAAAAATTGA 3072 0.402 MPECLPNGFDCKRKEDELGEKRRSDGFGSKKVKMMMDADSPYLASSGKSRELEDDNISYIIKKWTVGTRYDTVNFGRGSICFTLKWKYDLMKLCYLNEPSVLHNIKFRHSQDMIYTKAGPILIAVNPFKDLQIFGNDRISAYKQKFTNSPHVFAVADEAFTKMMRDEANQSIIISGESGSGKTETAKIAMQYLAAVGRSNRGTEEKILQTNHVLEAFGNAKTSRNENSSRFGKLIEIHFSTMGKIYGAKVQTCKLVQALDVTADSRVVQLASGERSYHIFYQLCAGSSFGLKERLNLRAASYYKYLNQSECLMIDGIDDAKKFHQLMKALDIVQICKEDQELIFKVLAAILWLGNISFKVADSENDIEVLDDEAVTSAARLMGCSSQALKAALSTKKIQPEKDTNTKKLILQQAIQTRDEIAKFMYENLFNWIVDQINRSLQVGKRCTGKSINILDITGFESFQKSSFEQFCINYANERLQQHLNRHLFKQEQEDYESDGIEWTKIYFKDNQECLDLFERKPHSLLSLLDEESNLPKASDLTFANKLKQHLSTNPYFKGERGRAFSVRHYEGEVLYDTNGFLEKNRDFMPSDSVQFLASCKCELLPLFSKMFDQSLKCSNSFGTGAVDSQEQSVCKKFKGQLFNLIDQLECTTPHFIRCIRPNTKQLPDIYDEDLVLQQLKCSGILEVVRTSRAGYPTRMTHQEFSTRYGFLLSEANKYQDPLSTSVAILQQFNIPSEMYQFGYTKLYLRAGQTGSLELKRKQVLQGIVVVQKYFRGYQARSYFQELKKGVATLQSFVRGEITRRKFGVMKPSITIYSKNLEEIQAIIQLQSVIRGWLARKDASTPNGFKSYPENAKHRRKSLVKMLEVKMSLVAARKSLASDSGNTQPTRNEVLSPRYYGSEDATLGSRTAVNTPIKFSSNFAVSDGGREANGIRERGTSGTLSSLMKEFDQRRQNFDDEVKALNDVKPGNSTTTNSIEEFRKLKQSFEGWKKQYKVRLRETKAKLHEADKSRRTWWGKLKN* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0206 1023 Pfam IQ calmodulin-binding motif 825 842 IPR000048 GO:0005515
Amo03g0206 1023 Pfam IQ calmodulin-binding motif 768 785 IPR000048 GO:0005515
Amo03g0206 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 813 IPR027417 -
Amo03g0206 1023 SMART MYSc_2a 83 763 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo03g0206 1023 CDD MYSc_Myo8 99 750 IPR036022 -
Amo03g0206 1023 Gene3D - 275 331 - -
Amo03g0206 1023 ProSiteProfiles IQ motif profile. 787 815 IPR000048 GO:0005515
Amo03g0206 1023 Gene3D - 696 763 - -
Amo03g0206 1023 Pfam Myosin head (motor domain) 89 750 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo03g0206 1023 PRINTS Myosin heavy chain signature 504 532 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo03g0206 1023 PRINTS Myosin heavy chain signature 169 194 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo03g0206 1023 PRINTS Myosin heavy chain signature 451 479 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo03g0206 1023 PRINTS Myosin heavy chain signature 115 134 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo03g0206 1023 PRINTS Myosin heavy chain signature 212 239 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo03g0206 1023 Gene3D Myosin VI head, motor domain, U50 subdomain 332 440 - -
Amo03g0206 1023 Gene3D - 463 652 - -
Amo03g0206 1023 ProSiteProfiles IQ motif profile. 766 793 IPR000048 GO:0005515
Amo03g0206 1023 Gene3D Kinesin motor domain 89 695 IPR036961 -
Amo03g0206 1023 ProSiteProfiles Myosin motor domain profile. 85 762 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo03g0206 1023 Coils Coil 948 968 - -
Amo03g0206 1023 Gene3D - 766 813 - -
Amo03g0206 1023 Coils Coil 993 1013 - -
Amo03g0206 1023 PANTHER MYOSIN 868 1021 - -
Amo03g0206 1023 SMART iq_5 786 808 IPR000048 GO:0005515
Amo03g0206 1023 SMART iq_5 763 785 IPR000048 GO:0005515
Amo03g0206 1023 SMART iq_5 822 844 IPR000048 GO:0005515
Amo03g0206 1023 PANTHER MYOSIN-2 ISOFORM X1 868 1021 - -
Amo03g0206 1023 PANTHER MYOSIN-2 ISOFORM X1 86 842 - -
Amo03g0206 1023 ProSiteProfiles IQ motif profile. 823 851 IPR000048 GO:0005515
Amo03g0206 1023 PANTHER MYOSIN 86 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0206 Amo-Chr3 4048241 4058508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0206 11 1020 Myosins gene family AT5G54280 50.958 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0206 K10357 - gmx:100802614 1147.11