Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0194 ATGGTGGTTGTGAAAAGGATTCCAAGTGGTTTTGCTCTTCTTGTTGTTTTCTTAGTGGTTTTGGTTAATGGCACATTTGGTTCGTACACTTTTACTGATAACTATCTTATTGCTTGTGGTTCTTCGAAGAATATTACATTCCAAGGTCGCAATTTTGTTCCTGACTCGCAGCATTCGAAACTCACATTGAAAACTCAGAACTCGGTTGTTGCGGATTCAAATTCCAGTGCCCCTTTTCCAGTTTACAAATCAGCTAGGGTTTTCACTGAGGCAGCTTCTTATAAATTTGAAATTGGGCAGCAAGGTAGGCACTGGCTCCGGCTATACTTTTCGCCTCTTTTGAATTCCGGTCGCAATTTGAGTTCTGCTTCAATGACTGTTGTTACTGATAATTTTGTCCTTTTGAGTAATTTTACCTTTAAGAATCGGCCCCATGGTTCTTGTGTGTTCAAGGAGTATGCAATCAATGTTACTGATAATACCTTGACTCTTAGTTTCATTCCGTCCAATGATTCGGTGGCCTTTATTAATGCAATTGAAGTTGTGTCAATGCCGGATGAATTGTTTGTTGATCAAGCATTGGGTCTTAACCCGACTGCGCCGGTCACTGGACTCTCTGGGGTTGCTTTGGAAACTGTTTATCGCCTCAACATTGGGGGTCCTTCAATTACAGCTCAGAATGACACATTGGGAAGGACTTGGGTGAATGATCAGAAATACCTTCATGTGAACAATTCGGTTGTTAATGTGTCTGTCAATCCTTCGAGCATTAAGTATCCAGTAGGTGTTACGCCCGAGACTGCTCCAAATTTGGTCTATGCCACTGCAGAAGCAATGGGGGATCCAAATGTAGGCAGTCCGAATTTCAACATCACTTGGGTCTTCAATGTTGATCCAAATTTCTCGTATTTTATTCGGGTGCATTTTTGTGATATCATGAGCAAGTCTCTCAACACTCTGGTCTTCAATTTGTTTATAAATACTGACATAGGTATTGGAAGTCTTGATCTGTCATCCATAACTAATGATTTGTCTGTTCCTTACTTCAAGGACTTTGTTTCCAATACCTCGGCGGGCTCAAACACTTTGACAGTAAGTGTTGGTCCGGATAAAATGGCCGACTTCCCAAATGCCACTATGAACGGGCTGGAGATAATGAAGATCAGCAATGCATTGCGGAGTTTGGATGGGCTTTCTTCAGTTGGCAGTCTCCTTCCTGGCTCATTGTCAAAGAAGAACAAGATAGCAATTATAGTTGGTTCTGCTGTTGGGGCTTTGGTTGTCGTAGCATTGGTTGGTTTGTGCTGTTGCTGCTTAATAGGGCGCAAGTCGAAGTCTACTGAACGGGGTAATTCATGGCTACCTTTACCCATCTATGGAAACTCGCTGACCTTGACGAAAATGTCAACAACTTCACAGAAGAGTGGAACAGCAAGCTGCAAATCTTTAACATCGTCGAATCTCGGACGATTCTTCAGTTTCCAAGAAATCCTAGATGCAACCAACAAATTTGATGAGAACCTACTTCTTGGTGTTGGTGGTTTCGGTAGAGTTTATAAGGGAACACTTGAAGATGGGACTAATGTAGCTGTTAAAAGAGGCAACCGAAGATCTGAACAAGGTCTTGCTGAATTCCGAACAGAAATTGAAATGTTATCAAAGCTTCGTCATCGTCATCTTGTGTCGCTCATTGGTTATTGTGATGAGAGGTCAGAAATGATTCTTGTTTATGAATACATGGCTAATGGACCCCTTAGGAGTCATTTGTATGGAACAGACTTGCCACCTCTATCATGGAAGCAGCGACTTGAAATTTGCATCGGAGCTGCAAGGGGCCTTCATTATCTCCACACCGGTGCCGCTCAAAGCATAATTCACCGAGATGTGAAGACAACAAATATTCTCTTAGATGAGAACTTTGTTGCTAAAGTTGCGGATTTTGGCCTTTCCAAAGCTGGTCCTTCTCTTGATCAAACCCATGTGAGCACTGCTGTTAAAGGTAGTTTCGGTTATCTCGATCCTGAGTACTTTAGAAGGCAACAACTAACCGAGAAATCTGATGTTTATTCATTCGGAGTAGTGTTAATGGAGGTGTTATGCACAAGGCCAGCCTTGAACCCTGTCCTTCCTAGGGACCAGGTTAATATAGCCGAATGGGCAATGATGTGGCAGAAAAAAGGGATGCTTGATCAAATCATGGACCAAAATCTTGTGGGGAAGGTGAGCGTTGCTTCTCTTAATAAGTTTGGGGAGACAGCAGAGAAGTGCTTGGCTGAGTATGGTGTGGACCGTCCGTCTATGGGAGATGTCTTGTGGAATCTTGAATATGCTCTTCAGCTTCAAGAAACCTCGTCGAGCCTCACAGAACCAGAAGACAACAGCACAAACCACATTACTGGAATTCAGTTGACTCCCCTTGAACACTTTGATAACAGTGTTACTATGATTGATGAGATAAACTCTTGCACATATGACAATATAGAAGATGCAGCTACAAGCACAGTGTTCTCACAATTGGTAAATCCTCGCGGAAGATGA 2538 0.4259 MVVVKRIPSGFALLVVFLVVLVNGTFGSYTFTDNYLIACGSSKNITFQGRNFVPDSQHSKLTLKTQNSVVADSNSSAPFPVYKSARVFTEAASYKFEIGQQGRHWLRLYFSPLLNSGRNLSSASMTVVTDNFVLLSNFTFKNRPHGSCVFKEYAINVTDNTLTLSFIPSNDSVAFINAIEVVSMPDELFVDQALGLNPTAPVTGLSGVALETVYRLNIGGPSITAQNDTLGRTWVNDQKYLHVNNSVVNVSVNPSSIKYPVGVTPETAPNLVYATAEAMGDPNVGSPNFNITWVFNVDPNFSYFIRVHFCDIMSKSLNTLVFNLFINTDIGIGSLDLSSITNDLSVPYFKDFVSNTSAGSNTLTVSVGPDKMADFPNATMNGLEIMKISNALRSLDGLSSVGSLLPGSLSKKNKIAIIVGSAVGALVVVALVGLCCCCLIGRKSKSTERGNSWLPLPIYGNSLTLTKMSTTSQKSGTASCKSLTSSNLGRFFSFQEILDATNKFDENLLLGVGGFGRVYKGTLEDGTNVAVKRGNRRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKAGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPRDQVNIAEWAMMWQKKGMLDQIMDQNLVGKVSVASLNKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSSLTEPEDNSTNHITGIQLTPLEHFDNSVTMIDEINSCTYDNIEDAATSTVFSQLVNPRGR* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0194 845 ProSiteProfiles Protein kinase domain profile. 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0194 845 SUPERFAMILY Protein kinase-like (PK-like) 482 775 IPR011009 -
Amo03g0194 845 Gene3D - 34 185 - -
Amo03g0194 845 Gene3D - 208 390 - -
Amo03g0194 845 SMART serkin_6 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0194 845 Gene3D Transferase(Phosphotransferase) domain 1 580 800 - -
Amo03g0194 845 CDD STKc_IRAK 510 775 - -
Amo03g0194 845 Pfam Protein tyrosine and serine/threonine kinase 509 770 IPR001245 GO:0004672|GO:0006468
Amo03g0194 845 Pfam Malectin-like domain 37 388 IPR024788 -
Amo03g0194 845 PANTHER OS07G0166700 PROTEIN 22 834 IPR045272 GO:0004714|GO:0006468
Amo03g0194 845 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Amo03g0194 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Amo03g0194 845 Gene3D Phosphorylase Kinase; domain 1 463 579 - -
Amo03g0194 845 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 22 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0194 Amo-Chr3 3770390 3773254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0194 29 845 Receptor kinase-like Gene Family AT3G46290 52.727 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo03g0194 Malectin_like 9.5e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0194 - - gmx:100809700 1336.63