Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0190 ATGGAGAACTCTTTCTTACGGCCACTTGGCCATCTTGAATTAGATCTTCCAGAAGCACCTACTATCAAGGCACCCCGTCTTCCTCCACTAGCTGTTGATCCATACACGAGATATGGGCCCAAAGCAGAGATAACCCACTTATTCAGGACTCCTGAAAGTAAAGTTGCTGTAGAAGGGAGAGTTCAGTTTGATCTGCTCCAGGTCAGCTTCACCGGTTCAATGGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTCTTATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGGTGAGATATGTGTTGAAAGTTCAGTGTGTTTGTTCAGGAAGGGAATGTGCTCAATAATTATATTAAAAGATGGATTTAGGCAAGGGTTCCTACTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGATGACAAGGGTGATTTCGTTGGCACTGCAGTTCGTTGAAGAGGAGACTGGCATAAAGTTCAAACTTGAAGACATGGTTGATCTCACTGCTTTCTTGGATTCTTCAACAGGATGCAGATTTTTTCCCTCACCGACAGTAGACTATAAGAGACCAACCTATGAAGAAGTTGAGAACCTCCAAGCCTTACTTCCAAGGGAGTGCAATATCTGCCAAATGCAAATCGGCGAAATGGTGAACTTTATGGATTCAAAATGTAGTTCAATCCATTTTCTTCACTAA 789 0.4233 MENSFLRPLGHLELDLPEAPTIKAPRLPPLAVDPYTRYGPKAEITHLFRTPESKVAVEGRVQFDLLQVSFTGSMEVGREIMHAAASSNLKQVSLELVGKSPLLIFDDADVDKAASLALLGIVYNKGEICVESSVCLFRKGMCSIIILKDGFRQGFLLEELFWNCLLECWMMTRVISLALQFVEEETGIKFKLEDMVDLTAFLDSSTGCRFFPSPTVDYKRPTYEEVENLQALLPRECNICQMQIGEMVNFMDSKCSSIHFLH* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0190 262 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 97 IPR016162 GO:0016491
Amo03g0190 262 Pfam Aldehyde dehydrogenase family 67 141 IPR015590 GO:0016491
Amo03g0190 262 Pfam Oligosaccharyltransferase subunit Ribophorin II 1 54 IPR008814 GO:0006487|GO:0008250|GO:0016021
Amo03g0190 262 SUPERFAMILY ALDH-like 68 137 IPR016161 GO:0016491
Amo03g0190 262 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 62 144 - -
Amo03g0190 262 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 98 139 IPR016163 GO:0016620
Amo03g0190 262 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 62 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0190 Amo-Chr3 3726323 3729896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0190 62 148 Aldehyde Dehydrogenase Gene Family AT3G24503 64.368 5.10e-29 112