Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0176 ATGGAGCTCAAAAAGGGAAAGCTTGTCAGGTTTTACTCGGACGGTAAAAAGCAGAAAGAACCATTGTGGAGAGCAACTGAACCACCAACACATGAGAAGTCATCCTCTGGATACAAGGTTGCCTCGTCTTCCTTGCATAAAGCTAGCAATGTATTTCCATCAGGAAAGAATATATTTGCCGAAACATTTAGAAGTCGAGGATCTAAGGTATTCCCCGAAGATCATGAGCCATGGAGCAAAATAATTCTTGACCCGGGCAGTGAGATTGTCCTGAAATGGAACCGGATTTTCATAGTTTCATGCTTGGTTGCTCTTTTTATTGATCCACTTTACTTCTATTTGCCTAGTGTCAGAGGGAATACAATGTCTGCGTGTGTGCGGACAGACCTAACATTACGGATTATTGTGACCTTTCTTCGGACTATTGCTGACATCTTTTATCTGTTGCACCTAATAATTAAGTTCAGAACAGCATATATCGCACCGAGTTCACGGGTTTTTGGCAGGGGTGAACTAGTCATGGACCCAAAGAAAATTGCAAGGAGATATATTAGATCTGATTTCTTCATTGACGTTATTGCCACACTACCTCTACCACAGATGTCCCAGAAATTGAGTGCTATTCTCCTGTCGGATGTTTTAGCCTTGAATGTTCATCTGGTTTATTATACCAGCAACAAAAGCCCTCAGACTGATCATAAGAATAATGCTCTGGCATTGATTGTTTTGCTTCAATATGTTCCGAGATTATATTTGATCTTTCCATTAAGTTCTCAAATAATCAAGGCAACAGGAGTGGTTACAAAGACTGCCTGGGGAGGAGCTGCATATAATCTGCTATTGTATATGTTGGCTAGTCATGTTTTAGGGGCATCATGGTACCTTTTGTCTGTGGATCGGTATACTACATGCTGGAAATCAATTTGCAAAAAAGAACCTAATCCTGAGAAATGCTTCAGTTACCTGGACTGCAGTCTTACTAATAACATGCAGCACAGGATATGGGCAAATACTACAAATGTGTTTAACAGATGTGATCCCAATAATGATATTGATTTCAAGTTTGGAATATTTGAAAGTGCTGTGAAAAAGCAAGTGGTCTCTTCAAACTTCATCCCAAAATACTTTTATTGTTTGTGGTGGGGGTTGCAGCAGTTAAGTTCTTATGGGCAGAACCTAGACACAAGCACTTTCATTGGAGAAACATCCTTTGCTATTCTTATTGCGATCATGGGTCTTGTATTATTTTCCCATTTGATTGGGAACATGCAGACATATTTGCAATCAATTACTATAAGGCTTGAGGAGTGGAGACTTAAGCGAAGAGACACAGAGGAATGGATGAGGCATCGCCAGCTCCCTGAAGATTTAAGAAGCCGTGTTAGACGATTTGTTCAATATAAATGGCTTGCAACTCGTGGAGTTGATGAAGAAACCATTCTACGTGCATTACCTGCAGATCTTCGCCGCGATATCCAGCGCCACCTATGCTTAGACCTTGTTCGGCGAGTTCCATTCTTCTCACAGATGGATGATCAACTTCTTGATGCAATATGTGAGCGGCTGGTATCATCTCTCAGCACTCTAGGTACCTACATTGTTCGCGAGGGAGACCCTGTTACTGAAATGCTCTTCATTATCAGAGGTAGATTGGATAGTTCTACTACAAATGGTGGCCGAACCGGTTTCTTCAACTCAATCATACTGAGGCCTGGGGATTTTTGTGGTGAGGAACTACTTTCTTGGGCTTTACTACCAAGATCAACCACAAACTTACCATCCTCAACTAGGACAGTTAAAGCCCTAAGCGAGGTAGAAGCTTTTGCTCTTCGAGCGGAGGACCTCAAGTTTGTAGCTAATCAATTTAGGCGCCTCCACAGTAAGAAGCTGCAGCACACCTTCCGATTTTACTCCCACCACTGGAGAACTTGGGCAGCCTGCTTTATTCAGGCTGCTTGGCGACGGTACAAGAAAAGGATGTCTGCCAAAGACCTCAGTTTGAGGGAATCCGTTCCTTTAGATGAGACGGCGGTCAGTGAGCGAGTAGACGATGAAGAGGAATACCCTGCCGTCTCGAATTCATCTCAGACTAAATTGAACCTTGGGGTAACAATACTTGCTTCAAGGTTCGCGGCTAACACAAGAAGGGGTGCTTTGAAGATAAAAGATGACCTGCCTAAGTTACCGAAACCCGAAGAACCTGACTTTTCTACCGAAGCTGACGATTAG 2229 0.4271 MELKKGKLVRFYSDGKKQKEPLWRATEPPTHEKSSSGYKVASSSLHKASNVFPSGKNIFAETFRSRGSKVFPEDHEPWSKIILDPGSEIVLKWNRIFIVSCLVALFIDPLYFYLPSVRGNTMSACVRTDLTLRIIVTFLRTIADIFYLLHLIIKFRTAYIAPSSRVFGRGELVMDPKKIARRYIRSDFFIDVIATLPLPQMSQKLSAILLSDVLALNVHLVYYTSNKSPQTDHKNNALALIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWGGAAYNLLLYMLASHVLGASWYLLSVDRYTTCWKSICKKEPNPEKCFSYLDCSLTNNMQHRIWANTTNVFNRCDPNNDIDFKFGIFESAVKKQVVSSNFIPKYFYCLWWGLQQLSSYGQNLDTSTFIGETSFAILIAIMGLVLFSHLIGNMQTYLQSITIRLEEWRLKRRDTEEWMRHRQLPEDLRSRVRRFVQYKWLATRGVDEETILRALPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTLGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPRSTTNLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMSAKDLSLRESVPLDETAVSERVDDEEEYPAVSNSSQTKLNLGVTILASRFAANTRRGALKIKDDLPKLPKPEEPDFSTEADD* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0176 742 Gene3D Jelly Rolls 504 624 IPR014710 -
Amo03g0176 742 SUPERFAMILY Voltage-gated potassium channels 87 428 - -
Amo03g0176 742 SUPERFAMILY cAMP-binding domain-like 436 628 IPR018490 -
Amo03g0176 742 MobiDBLite consensus disorder prediction 721 735 - -
Amo03g0176 742 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 53 739 - -
Amo03g0176 742 Gene3D - 96 431 - -
Amo03g0176 742 Gene3D Helix hairpin bin 434 497 - -
Amo03g0176 742 CDD CAP_ED 506 637 IPR000595 -
Amo03g0176 742 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 53 739 - -
Amo03g0176 742 MobiDBLite consensus disorder prediction 721 742 - -
Amo03g0176 742 SMART cnmp_10 506 637 IPR000595 -
Amo03g0176 742 Pfam Ion transport protein 93 432 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo03g0176 742 Pfam Cyclic nucleotide-binding domain 530 617 IPR000595 -
Amo03g0176 742 ProSiteProfiles cAMP/cGMP binding motif profile. 506 590 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0176 Amo-Chr3 3406210 3413468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0176 1 742 Ion Channels AT4G30360 67.781 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0176 K05391 - gmx:100810967 1212.21