Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0146 ATGAAAGAAAATAGTGTCACTTTGAAAGCTGGAGAGCTCCCTTGTCGATTGACTCGTGCTCGAGCTGCTGCATTTCGTGCATCAGGACAGCTTCCACCAGTGAAGGAACCAGCAAAGCAGCAGAATCAGAAGCAGCCGCAGCTGCGAGCCAATCCAAAAAGAGCAGTTTCTGATAATGCTTGTCTTCAGCGCAAGAAGAGAGCTGTTCTTCAGGATGTTACTAATGTTTTCTGTGAGAATACTTACAGGAGCTGTTTCAATTCAACTAAAATTCAGGGTAAGAAGAGCAAGCTGGCAATGGCTAGTCGAATCAATGTTTCCAAAGTGGCGCCTTCTGCTGCTGCGCAGCAACATGTTCGAGTTCACTGCAAAACAAAGAGTTTTCCGGAGCCAGGTCTTAAATCAGAAGATGCATCTTGTTCAATTAATTCAGAAAACAATGCACTCATTAGGCTAAGTGTGAAAGAGAGTGGCAAGGATGATAAAACTCATGCCTCAGGAATCTCTCCTCTGCCTTTGATTTTGCAGAAGAAAGCCAAGAAGTGTAGCCCTTTTCCAATTGCATTAAGGGATCCAGAGATTGCTAACATAGATGATGATAATGAAGATCCTCAGTTGTGCAGCCTCTATGCTGCTGATATCTAYAACACCTTGCGAGTTTATGAGCTCGCAAGAAGGCCGAATCCTAACTTTATGGACACAAAGCAGCACGACATTACTCAAAGCATGCGCGGGATACTGGTCGATTGGCTTGTAGAGGTTTCTGAGGAATACAGATTGGGACTAGACACTCTTTATCTCACTGTGTATCTCATAGATTGGTTTCTCTCCAGAAATTACATAGAAAGACAGAGACTTCAGCTACTTGGGATCACATGCATGTTAATCGCCTCGAAGTATGAAGAAATTAATGCCCCACGAATCGAAGATTTTTGCTACATCACAGACAACACATACACGAAAGTGGAGGTACTGAAAATGGAGAGCCAAGTGTTGAAATCTTCTGGATATCAGCTTTTTGCTCCCACTACAATAAGTTTCCTCAGGAGGTTTCTTCAAGCTGCTCAAGCATCATCCAAGAGTCCGAGCCTTGAATTGGAGTACTTGGCCAACTATCTAGCTGAACTAACATTGATGGAATATAGTTTCTTGAATTTCCTTCCATCTACCATTGCTGCATCAGCTGTGTTCCTTGCCAAATGGACATTGGATCAGTCAAAACATCCATGGARTCCAACTCTTCAGCACTATGCTTGTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCATTACAAGATCTGCAGTTGAATATCAATGGATGCCCTCTAACTGCGATTCGCTCGAAGTACAGTCAAGACAAGGGTCCTTGTCTCCACCAAAACTACCTGAAACTATGTTCTGAAGAATGA 1413 0.4289 MKENSVTLKAGELPCRLTRARAAAFRASGQLPPVKEPAKQQNQKQPQLRANPKRAVSDNACLQRKKRAVLQDVTNVFCENTYRSCFNSTKIQGKKSKLAMASRINVSKVAPSAAAQQHVRVHCKTKSFPEPGLKSEDASCSINSENNALIRLSVKESGKDDKTHASGISPLPLILQKKAKKCSPFPIALRDPEIANIDDDNEDPQLCSLYAADIYNTLRVYELARRPNPNFMDTKQHDITQSMRGILVDWLVEVSEEYRLGLDTLYLTVYLIDWFLSRNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCYITDNTYTKVEVLKMESQVLKSSGYQLFAPTTISFLRRFLQAAQASSKSPSLELEYLANYLAELTLMEYSFLNFLPSTIAASAVFLAKWTLDQSKHPWXPTLQHYACYKASDLKTTVLALQDLQLNINGCPLTAIRSKYSQDKGPCLHQNYLKLCSEE* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0146 470 CDD CYCLIN 342 432 IPR013763 -
Amo03g0146 470 Gene3D - 227 340 - -
Amo03g0146 470 Pfam Cyclin, N-terminal domain 213 334 IPR006671 -
Amo03g0146 470 PANTHER CYCLINS 46 459 IPR039361 -
Amo03g0146 470 SUPERFAMILY Cyclin-like 202 338 IPR036915 -
Amo03g0146 470 Gene3D - 213 455 - -
Amo03g0146 470 CDD CYCLIN 243 332 IPR013763 -
Amo03g0146 470 SUPERFAMILY Cyclin-like 342 455 IPR036915 -
Amo03g0146 470 SMART Cyclin_C_2 342 470 IPR004367 -
Amo03g0146 470 PIRSF Cyclin_A_B_D_E 18 460 IPR039361 -
Amo03g0146 470 PANTHER CYCLIN-A2-4 46 459 - -
Amo03g0146 470 SMART cyclin_7 249 333 IPR013763 -
Amo03g0146 470 SMART cyclin_7 346 434 IPR013763 -
Amo03g0146 470 MobiDBLite consensus disorder prediction 26 55 - -
Amo03g0146 470 Pfam Cyclin, C-terminal domain 342 455 IPR004367 -
Amo03g0146 470 MobiDBLite consensus disorder prediction 35 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0146 Amo-Chr3 2698062 2701738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0146 2 455 Core Cell Cycle Gene Families AT1G80370 51.724 2.27e-154 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0146 K06627 - gmx:100793657 619.002