Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0095 ATGGAACGCTCAAATCCGGAAGGGGAACCGAATAGCACAGTGATCAATGCTAGTGAAGGCAATGATGAATTGAATGACGATGGCGTTGTTAATCAAGAGGGTTCCTTGGTCGACGAAATCACCGACGTCATGGTGACGAGAAATGATGAGTTGGATTTAAGACACGAGTTGCCAGATCATAGTGGGCTCAGTGAAGAGAAAATCTCAGCCATAGGAATGAGATTTGATTCGCTGCATTTGGCACAGGAGTTTTATGCAATTTATGCAAAGAAATTGGGGTTTGTAACTAAAGTCAGGAATACGAACTTCAACAAGATGCGGAAGGACACAAAGATACCCATTAATCAATCTCTTCACTGCACTCGAGAGGGTTATCGAGAATCTCGTGTTAAGGCAGCAACTAGGTCAAACAGAATAACAGCCACGAGATGCAAAGCAAGAATGTATGTCATGCTGGACAGGGAGAAGGAATGTTGGGTTGTGTCCAGGGTAGAATTGAGGCATTCTCACCCCTGTTCGGCTGAGAAAGTTGTCCACTATCATGAGTACCGGGAGCTGACCATGCATGCCAAGTGCGTCATTACGGATAACGACGAGGCTGGCATAAGACCCAACAAGATGTATCTAGCACTGGCAAACAAAGTTGATCTTTATGCGAATCGACGTAAGTGGGTGCCAATATTCTTCAAGAGTGAATTTTGGGCCGGCATGAGGAGTACACAGCGGAGTGAAAGTATGCACGCATTCTATGGTGGATACCTTCATTGCAAGAGTGGGTTGGTTCACTTCGTCAATGAATACGATAACGTGCTTGGAAACAAGAAGCAAAAGGAGCTTGAAGATGATGCTGCGGACTCGAAAGGAGTCATCCCATGTATAGGGAGCACAGGCATTGAGCGACAGTTTCAGCAGGAATACACCAGTAATATGTTCCGGACCCTTCAGCTGGAGGTAAGAAAAAAAACCGATTGTGTGGTTCGATCAACTGAACAAAAGGGAGATACAATTTCTATTAAAGTGGACGAGCAGAAGGTATTTTGGGGGAAGCCTGTCTACCATACTTTCATAGTACAGTTTGACCCTTTGAGTCGAAAGAGTCGGTGCGAGTGCAACAAATTTAAATCCGTTGGTATATTGTGTTGCCACATCCTTGCGGTGTGGTCATACTATAGAGTTGACACAGTACCGAGCTGCTATGTTCTTCCTCGATGGAGTAAGAATGTCATCCGCAAGCACACTTACATTAAGAGTAGCCATGACGTGGCTTGGAGTAATGAAAGCCACAATTTGTTCAGGCATCTGTGTTCGGAGTTCTATAACGTTGCTCAGGAGTTTGTTGCTTGTGAAGAGGAAGCAGCCATCTTGCGAGCTGCCCTTTCGGATGCAAAGTCCAAGCTGACTGATCACCGTGCCAGCATGCGTTCCACTACTCTTGATGGGACTCAGAATACGATGCCCACACGAAGCACATGCGATGGTAAGAGACTTGGAGCAGAGTTGGACAAGTCAATTAAGAAGTCAATGGAAAAAAGGAAGAGGAAATCACAACCGGATGTTGTTGACCTTCAGACAGATAATGATCGCCAAGGTTCTGTAGACAACAGATTTGAGGATTCTACTATATGGAATTCATCAGATGGTGGCGGATTCATGGACCTGTTGAACTCTTTTAGGCATTTATAG 1683 0.4504 MERSNPEGEPNSTVINASEGNDELNDDGVVNQEGSLVDEITDVMVTRNDELDLRHELPDHSGLSEEKISAIGMRFDSLHLAQEFYAIYAKKLGFVTKVRNTNFNKMRKDTKIPINQSLHCTREGYRESRVKAATRSNRITATRCKARMYVMLDREKECWVVSRVELRHSHPCSAEKVVHYHEYRELTMHAKCVITDNDEAGIRPNKMYLALANKVDLYANRRKWVPIFFKSEFWAGMRSTQRSESMHAFYGGYLHCKSGLVHFVNEYDNVLGNKKQKELEDDAADSKGVIPCIGSTGIERQFQQEYTSNMFRTLQLEVRKKTDCVVRSTEQKGDTISIKVDEQKVFWGKPVYHTFIVQFDPLSRKSRCECNKFKSVGILCCHILAVWSYYRVDTVPSCYVLPRWSKNVIRKHTYIKSSHDVAWSNESHNLFRHLCSEFYNVAQEFVACEEEAAILRAALSDAKSKLTDHRASMRSTTLDGTQNTMPTRSTCDGKRLGAELDKSIKKSMEKRKRKSQPDVVDLQTDNDRQGSVDNRFEDSTIWNSSDGGGFMDLLNSFRHL* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0095 560 MobiDBLite consensus disorder prediction 494 521 - -
Amo03g0095 560 PANTHER OS03G0843700 PROTEIN 217 456 - -
Amo03g0095 560 PANTHER OS03G0843700 PROTEIN 59 182 - -
Amo03g0095 560 Pfam FAR1 DNA-binding domain 83 172 IPR004330 -
Amo03g0095 560 MobiDBLite consensus disorder prediction 470 539 - -
Amo03g0095 560 Pfam SWIM zinc finger 364 386 IPR007527 GO:0008270
Amo03g0095 560 SMART 26again6 366 393 IPR006564 GO:0008270
Amo03g0095 560 MobiDBLite consensus disorder prediction 473 490 - -
Amo03g0095 560 ProSiteProfiles Zinc finger SWIM-type profile. 355 391 IPR007527 GO:0008270
Amo03g0095 560 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 182 IPR031052 GO:0006355
Amo03g0095 560 MobiDBLite consensus disorder prediction 1 29 - -
Amo03g0095 560 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 217 456 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0095 Amo-Chr3 1802314 1805912 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g0095 FAR1 1.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0095 - - ahf:112730161 585.104