Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0088 ATGGCTGACGAAGTGGTTCTACTAGATTTCTGGCCAAGCCCATTCGGCATGAGGGTCAGAATAGCTTTGGCGGAAAAGGGGATCGACTATGAGGGTAGAGAAGAAGACTTGAGCAACAAGAGCCCGCTTTTGCTGAAGATGAACCCTGTCAACAAGCAAATCCCTGTTTTGATTCACAAGGGAAGACCAATCTCCGAATCACTCATCATTGTTCAGTACATTGATGAGGTTTGGAGCAATAACAAGTCTCCTTTGCTGCCCTCTGATCCTTACCAGCGAGCCAATGCAAGGTTTTGGGCTGATTATATAGACAAAAAGATTTACTCAACGGGGAGATTGGTGTGGGGAACGACAGGGGAGGTTCAAGAGAAAGCAAAGGAGGAGTTGAGGGAGAGCTTTAGGGTGCTTGAGAAAGAGTTAGCGGAGAAGACTTATTTTGGGGGAGACATGTTTGGTTTGGTTGACGTGGCTCTCATTCCCTTCTACAGCTGGTTCTATACTCTTGAGACCACTGCCAACTTCAGCATCACTGAGGAATTTCCCCGGCTTGTGTCTTGGGCCAAGCGCTGCATGCAGAGGGACAGCGTTTCCAACTCCGTTCCTGATCAGTACAAAATTTATGACTTCCTTTTGGACCTTAAGAAGAAGATGCACTCAATTGAATGA 666 0.4685 MADEVVLLDFWPSPFGMRVRIALAEKGIDYEGREEDLSNKSPLLLKMNPVNKQIPVLIHKGRPISESLIIVQYIDEVWSNNKSPLLPSDPYQRANARFWADYIDKKIYSTGRLVWGTTGEVQEKAKEELRESFRVLEKELAEKTYFGGDMFGLVDVALIPFYSWFYTLETTANFSITEEFPRLVSWAKRCMQRDSVSNSVPDQYKIYDFLLDLKKKMHSIE* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0088 221 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Amo03g0088 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 -
Amo03g0088 221 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Amo03g0088 221 CDD GST_N_Tau 5 78 - -
Amo03g0088 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Amo03g0088 221 SFLD Main (cytGST) 2 218 - -
Amo03g0088 221 Gene3D Glutaredoxin 1 88 - -
Amo03g0088 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Amo03g0088 221 SUPERFAMILY GST C-terminal domain-like 76 217 IPR036282 -
Amo03g0088 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 213 - -
Amo03g0088 221 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Amo03g0088 221 Pfam Glutathione S-transferase, C-terminal domain 120 194 IPR004046 -
Amo03g0088 221 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Amo03g0088 221 Gene3D - 89 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0088 Amo-Chr3 1721644 1723396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0088 1 217 Glutathione S-transferase Gene Family AT1G78380 61.751 1.03e-99 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0088 K00799 - twl:119982746 349.747