Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0051 AAACTTAGAGATGGGTGTGAGATTATAATTGAAAGAGTATCATCCAATGACAAGAGGCAAATATTTCAGCAGTTCCTCAATGAAATTTTGGTTTCCAATATCCTGCATCACAAAAATCTCGTGACATTTCGCGGTTATGCCTTTCATCATGAGAAATTCCTGGTAGCACATGAATATCTCTCCAATGGCACTCTTGCTGCTTATCTTGAATGTGAAATCCAACATAATAAATGCACATTACCTTTGCTTACTCGAATGGAAATCGCCATCGATATTGCGAATGCATTGAGCTATCTTCACAAGCATGGCATCATCCACCATAACATAAACTCCAGCAATATTCTGCTAGATAAGAGCATGTGTGCTAAAGTTGCTGGCTTGCACTTATCAGTTAACAAGGAAACTTCCAGAGGATGTTTCTGTCAATGCCACCAGCATTGTTTCAATTTCAAAGTACGTGTGTCTCATGGCAGAGTCAGCACCAAGAATGATGTTTATAGCTTCGGAGTAGTGTTGTGCGATTTGATATCATCCAAGCTTGCTAAGTATTGGGAAGGTTGTGACCGAGAAAGTATTGCTGTATTGGATCCAAGAACTGGCTTTGAATCAGACCATAAGATCATGCAGGTGATGACTGCAATGGTGGAGCTTGCACTTAATTGCATGGGATTTCCACAAGAACTCAGGCCGAATATAATCTTTGACTATGCTGATCTCAAAAAAGCTACCATGCAATTTCGTTCAGATAGGATCCTTGGAAAGGGAGGGCTCGGCTGCCAATTCATGAATAAAATCGAGATCTTAAGACTCTTGCACCATAGAAACCTGGTTTCACTCTACGGCCGCAGCTCCGGAATATTTCCAAACAGGCAGGTGGTCTTGTTTGAGCTCATATCATCTAAACCTGCATTTTGGAGGGAAGTCCCACAAGGCGAGGCGGTTGGCCTTGCTAAGTTTGCAATAATCAAACTGTTAAATAACACATTGAAGGAGCTAGTAGATCCAGATATTGGGTATGATTCAGATAAAGATGTAACGGAAATGGTAACAGCAGTGGCAGAGTTGGCCTTTCAGTGCATTCAGTGTCCTAAAGAGCTTAGACCTTCCATGAAACAGGTGCTGGAGACCCTTGAGGGTATAAAGAAGGGAACATGGGGATTCAACCAGATAATTTATGTTTCTTCTTCACTAATGGTAGTGGAAGTAAACACCACGCTTCACATCCAATTATTGATTCTGAGTGGTGATGATGAACAACATGAGCCTCTGGATTCTAAGGTTCAAACAAGCTGGGATGAACCGGTGGTTCCTGTGATCTCTGATGAGTTACCAAGTGATCATGATCAAAATCAATCACTTTTGTTGGTTGATTCTGTGTACTGCCACATAAATGAGGTGTTTGAGTATTCTGAACTTGAAGAAGCCACCAACAATTTTGACCCTAGTAGAGAACTTGGATCTGGAGGATATGGGACAGTTTATTTTGGAATACTCAAAGATGGACGTCATGTGGCAATAAAGCAGTTGCACAAAGACATGCTGAGAAGTTTAAGGTTGCATGACGAGAATTCCGAGAGCAATGATAGACTCACCAAGTTCTCAAACGAATTTGGCATCATGAAAATCTTGTCCAGCTATATGGCTGCACCTCTCCTCAGAGCCATGAAGTAA 1671 0.4147 KLRDGCEIIIERVSSNDKRQIFQQFLNEILVSNILHHKNLVTFRGYAFHHEKFLVAHEYLSNGTLAAYLECEIQHNKCTLPLLTRMEIAIDIANALSYLHKHGIIHHNINSSNILLDKSMCAKVAGLHLSVNKETSRGCFCQCHQHCFNFKVRVSHGRVSTKNDVYSFGVVLCDLISSKLAKYWEGCDRESIAVLDPRTGFESDHKIMQVMTAMVELALNCMGFPQELRPNIIFDYADLKKATMQFRSDRILGKGGLGCQFMNKIEILRLLHHRNLVSLYGRSSGIFPNRQVVLFELISSKPAFWREVPQGEAVGLAKFAIIKLLNNTLKELVDPDIGYDSDKDVTEMVTAVAELAFQCIQCPKELRPSMKQVLETLEGIKKGTWGFNQIIYVSSSLMVVEVNTTLHIQLLILSGDDEQHEPLDSKVQTSWDEPVVPVISDELPSDHDQNQSLLLVDSVYCHINEVFEYSELEEATNNFDPSRELGSGGYGTVYFGILKDGRHVAIKQLHKDMLRSLRLHDENSESNDRLTKFSNEFGIMKILSSYMAAPLLRAMK* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0051 556 ProSiteProfiles Protein kinase domain profile. 479 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0051 556 Gene3D Transferase(Phosphotransferase) domain 1 1 234 - -
Amo03g0051 556 ProSiteProfiles Protein kinase domain profile. 1 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0051 556 Gene3D Transferase(Phosphotransferase) domain 1 291 386 - -
Amo03g0051 556 PANTHER TYROSINE KINASE FAMILY PROTEIN 260 284 - -
Amo03g0051 556 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 292 390 IPR044652 -
Amo03g0051 556 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 465 513 IPR044652 -
Amo03g0051 556 Gene3D Phosphorylase Kinase; domain 1 455 550 - -
Amo03g0051 556 SUPERFAMILY Protein kinase-like (PK-like) 465 545 IPR011009 -
Amo03g0051 556 PANTHER TYROSINE KINASE FAMILY PROTEIN 14 235 - -
Amo03g0051 556 Pfam Protein tyrosine and serine/threonine kinase 7 231 IPR001245 GO:0004672|GO:0006468
Amo03g0051 556 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 260 284 IPR044652 -
Amo03g0051 556 PANTHER TYROSINE KINASE FAMILY PROTEIN 465 513 - -
Amo03g0051 556 PANTHER TYROSINE KINASE FAMILY PROTEIN 292 390 - -
Amo03g0051 556 SUPERFAMILY Protein kinase-like (PK-like) 226 281 IPR011009 -
Amo03g0051 556 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 235 IPR044652 -
Amo03g0051 556 ProSitePatterns Protein kinases ATP-binding region signature. 485 507 IPR017441 GO:0005524
Amo03g0051 556 SUPERFAMILY Protein kinase-like (PK-like) 9 232 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0051 Amo-Chr3 1205072 1214819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0051 448 543 Receptor kinase-like Gene Family AT1G25390 38.542 1.85e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo03g0051 PK_Tyr_Ser-Thr 1.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0051 - - ahf:112775772 318.546