Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0047 ATGGCTGTAACCGACCGGTGTTTCGTGGAATGGAAAGAGCAGTTTGTTTCCCAAGAGCGTGGCAACCGTGTGGTCCACTATTACCTGAAGGATTCTGATGGGGAATCCATACTTGCTGTTGTGGGCACTGAGAGGAGTGTTAGACACATGTTCTACGTTGTCGCCGATGAGTTTTTGGAAATTTGTGGGAAGGAAGGTTCTGTTCCTGCCGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTTGATTGGCTGACGTCAACACTTTCAAAGCAGCATCTTCAAGGAGATAGAAGTGGATCACCTAGTCATTCTTTAGGACATGCTTATGATACCACAAATGGTAGTGTCAATGAAATTACTGGTCTTCCTGCTCCGATAGCGAATGGCAAGGGATTTCTAACCCGAAACTCCAAATTATCCAAGTCTGACATTGTTTGGTCTGGAGTGGCGTGGACGTGTGGCAAGCAGCTTAAACATTATCATGCTTTTTGCAGGAATGGCATCAAAATAATTGTTCAATCATTTGTTTTTGTCATGGGCAAGGGAGAGAATCATTATGTTGCTTATTTAGAGGATATGTATGAAGATAGGAGGGGGCAGAAAAAGGTCAAAGCGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTGATTCCCATACGAAATCCACATCCTCGGGAAGTTTTCATCACACCATATTCTCAAGTCATTAGTGCAGAGTGTATTGATGGTCCTGCCACGGTCTTAAGTCGTGAACACTATGAAAAATGCATGCCTTGCTTTTCCCCAACTTCATCTGATAGAATACATATGTGCTTTAGGCAATTTAGGAGCAACAAAGTCAAGCCCTTTGACTTGAGTAAACTGCGTGGCTACTATGATCAACCAATTCTTTCTTGCTTGCAATTTGATTCTATGCTGAACCCCAAGGGAAATAGCCTAGCAGGAGGAGATGAAGAGTTGAGTGCAGGTGAAAATGTAAAGCTCAGAGCCAAGAGAAGGGATAGGGGAACTCCTCAGTCTTTGATGGGTCGACAAGGAGTTAGGAAGTTAGTTAGGAGTCAGCAAATGATGGTATACAAAAACTCTCAGGGTGTAAATAATTCTAGGACAGATAGGAAATTGTTTTCTCAGAAGGAAGTTGAATCTCAACCTTGGTATAATGTCACATACAAGATTGATGACAAGATAGAGGTCCTCTGTCAGGATAGCGGTATCAGAGGCTGCTGGTTCAGGTGTACGGTTGTGCAGGTATCTCGGAAACAGATGAAAGCCCAATATGATGATATTCAGGATGAAGATGGAAGTGGGAATCTTGAGGAATGGATCCCTACTTTCAAGTTGGCCATGCCAGATAAACTTGGGATGAGACATCCTGGCCGATCAACAATCAGGCCAGCTCCTCCAACCTCCGACGATCAAGAATTGGTTATTGGGGTTGGAACTGCAATTGATGCATGGTGGAGTGACGGCTGGTGGGAGGGAGTTGTAACTGAAACTGATAACTATGTTGATGATAATGTGCAAGCATACTTTCCTGGTGAACGGTTGCTAATGAAAGTAAGCAAGAAAGATCTAAGAATATCTAGAGATTGGTCCGGGGACAAGTGGATTGGTATTAAGCCGAAGCTCGATATAGCCTCAACTATATTCGACATAAACGGCGTTAACACGAAGCATTCCACGTCCCCAGCTAAAGACAGGGACTCTGTTGGTGCTGCAAATTCATGTGATGAAGTTCCGGCAAGTGACGAGACTATTAATGAACCAGATTTTGCTGAAGAAAAGGTTGAGGGTGTTGCTGAAGATGGGGATAACAATGATGATGATGGTGATATGATAATAATAATAATAATCTTTTGTCAGAAAAAGATACTGAAGTAG 1884 0.4315 MAVTDRCFVEWKEQFVSQERGNRVVHYYLKDSDGESILAVVGTERSVRHMFYVVADEFLEICGKEGSVPAGFKWRSRREVVDWLTSTLSKQHLQGDRSGSPSHSLGHAYDTTNGSVNEITGLPAPIANGKGFLTRNSKLSKSDIVWSGVAWTCGKQLKHYHAFCRNGIKIIVQSFVFVMGKGENHYVAYLEDMYEDRRGQKKVKARWFHHNQEVKGVIPIRNPHPREVFITPYSQVISAECIDGPATVLSREHYEKCMPCFSPTSSDRIHMCFRQFRSNKVKPFDLSKLRGYYDQPILSCLQFDSMLNPKGNSLAGGDEELSAGENVKLRAKRRDRGTPQSLMGRQGVRKLVRSQQMMVYKNSQGVNNSRTDRKLFSQKEVESQPWYNVTYKIDDKIEVLCQDSGIRGCWFRCTVVQVSRKQMKAQYDDIQDEDGSGNLEEWIPTFKLAMPDKLGMRHPGRSTIRPAPPTSDDQELVIGVGTAIDAWWSDGWWEGVVTETDNYVDDNVQAYFPGERLLMKVSKKDLRISRDWSGDKWIGIKPKLDIASTIFDINGVNTKHSTSPAKDRDSVGAANSCDEVPASDETINEPDFAEEKVEGVAEDGDNNDDDGDMIIIIIIFCQKKILK* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0047 627 Pfam BAH domain 172 272 IPR001025 GO:0003682
Amo03g0047 627 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 597 - -
Amo03g0047 627 SMART agenet_At_2 476 534 IPR014002 -
Amo03g0047 627 SMART agenet_At_2 389 454 IPR014002 -
Amo03g0047 627 PANTHER OS07G0607300 PROTEIN 4 597 - -
Amo03g0047 627 Gene3D - 135 292 IPR043151 -
Amo03g0047 627 CDD BAH_plant_1 163 292 - -
Amo03g0047 627 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Amo03g0047 627 SMART BAH_4 168 287 IPR001025 GO:0003682
Amo03g0047 627 Pfam Agenet domain 394 469 IPR008395 -
Amo03g0047 627 MobiDBLite consensus disorder prediction 558 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0047 Amo-Chr3 1176796 1182190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0047 403 533 PHD Transcription Factor Family AT5G58610 29.851 1.22e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0047 - - gmx:100306240 910.598