Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0043 ATGGAGTTTGTGCGACCTCTTCCCCTTTTGTTGATTCTCTTATCTGTTTTGTCGACCACCCAAGCCATCAAATTTAACGTTGGTGGAAGCGCAGGGTGGGTTCCAAACCCTTCTCAGAGTTACAATCAATGGGCTGGGAGCAACAGGTTCCAAATCAATGACACTCTAGTTTTCAAATACAAGAAGGGTTCAGACTCGGTGCTAGAGGTGAAGAAAGAAGACTACGATAAGTGCAACAAATCAAACCCAATAAAGAAGTTTGACGACGGTAACACGGAATTCACCTTGGATCATTCAGGTCCATTCTACTTCATCAGCGGCCAAGACCAAAACTGTCAGAACAAAGGTCAGAAACTAATCGTTTGTTGTCTTGCACCATCTGGCTCGCCGCCGGTGCCGGCACCGACACCAGCACCCGCCGGAAATCCTCCGGCGCCTTCCGTTTCACCACCTACACCAACTCCGGCGACTTCACCGGCTCCGGCGGGGAATTCACCGTCACCATCTCCTGTAAGTGGACCTCCGGCCCCGACTCCGGCGGGTACAACGCCGTCTCCTTCATCTGGATCACCGGGTCCGACGACTTCACCCCCCGTTCCGCCTCCGGCGACACCTCCGGGGGGTGCAGCTCCTGGAACGGCTAATCCGCCAGCTTCAAGTGAAACGGCTCCACCGCCGGGAAAAAATAACGCATGGGCTGCTACTCCTTCGAAATTCTTGGTGTATTCGGCTACCATTGTTGTTGCTGCCATGTTCTTCGTTTGA 765 0.5307 MEFVRPLPLLLILLSVLSTTQAIKFNVGGSAGWVPNPSQSYNQWAGSNRFQINDTLVFKYKKGSDSVLEVKKEDYDKCNKSNPIKKFDDGNTEFTLDHSGPFYFISGQDQNCQNKGQKLIVCCLAPSGSPPVPAPTPAPAGNPPAPSVSPPTPTPATSPAPAGNSPSPSPVSGPPAPTPAGTTPSPSSGSPGPTTSPPVPPPATPPGGAAPGTANPPASSETAPPPGKNNAWAATPSKFLVYSATIVVAAMFFV* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0043 254 MobiDBLite consensus disorder prediction 131 230 - -
Amo03g0043 254 CDD OsENODL1_like 24 121 IPR041846 -
Amo03g0043 254 PRINTS Proline rich extensin signature 168 180 - -
Amo03g0043 254 PRINTS Proline rich extensin signature 129 141 - -
Amo03g0043 254 PRINTS Proline rich extensin signature 184 205 - -
Amo03g0043 254 PRINTS Proline rich extensin signature 143 159 - -
Amo03g0043 254 ProSiteProfiles Phytocyanin domain profile. 23 125 IPR003245 GO:0009055
Amo03g0043 254 PANTHER BLUE COPPER PROTEIN 9 132 IPR039391 GO:0009055
Amo03g0043 254 Pfam Plastocyanin-like domain 33 114 IPR003245 GO:0009055
Amo03g0043 254 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 9 132 - -
Amo03g0043 254 MobiDBLite consensus disorder prediction 131 223 - -
Amo03g0043 254 Gene3D - 21 126 IPR008972 -
Amo03g0043 254 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0043 Amo-Chr3 1042111 1043409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0043 9 216 Phytocyanin Superfamily AT4G27520 44.712 3.95e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0043 - - gmx:100795901 192.971