Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0037 AGCCCCTTATATAAAACCCTCAACTCAAGGCACTCAGCCATGACTGGCAGAGAAATCCTCCACAAGATGAAGGAAAAAGTGTTGGGGTCATCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCTAAGAACATAACTCATGGCTTCCATTTGGTAAAGGGAAGATCAGATCATGCTATGGAAGACTATCTTGTTGCTCAATTTAAGCAAGTCGAAAATAATGAGTTGGGTTTGTTTGCAATATTTGATGGCCACTCTGGTCACAGTGTACCTGATTACTTGCGGTCTCATTTGTTCGATAACATCATGAATGAGCCTGACTTCTGGACAGACCCTGCTAATGCTGTGAAGAGAGCCTATAGTGTAACTGATTCTACTATTTTGGAGAAATCAGGCGAATTGGGCAGAGGGGGTTCAACTGCTGTTACAGCAATATTGATTAATTGTCAGAAGCTAATAGTGGCCAACATTGGGGACTCTCGGGCTGTCTTATCGGTGAATGGCAAGGCCAAACAACTATCTGTGGATCATGAACCAAACACAGAATGGGAGGACATCAAGAACAGAGGTGGTTTCGTATCTAACTTCCCAGGTATGACAGGCATTGGTGACAAAAGCCTGAAGAAACACTTGAGCTCTGATCCATATGTGACAGTGGAGCTCATAGGTGATGGTGCAGAGTTTATCATATTAGCCAGTGATGGTTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATGCTATCAAAGACATAAAAGATGCTCGGTCTGCAGCAAAACACCTTACTGAAGCAGCAGTTAACAGGAAAAGCTCGATGATATCTCTTGTGTTGTTGTGA 843 0.4282 SPLYKTLNSRHSAMTGREILHKMKEKVLGSSDPDSGKGKSKMSKNITHGFHLVKGRSDHAMEDYLVAQFKQVENNELGLFAIFDGHSGHSVPDYLRSHLFDNIMNEPDFWTDPANAVKRAYSVTDSTILEKSGELGRGGSTAVTAILINCQKLIVANIGDSRAVLSVNGKAKQLSVDHEPNTEWEDIKNRGGFVSNFPGMTGIGDKSLKKHLSSDPYVTVELIGDGAEFIILASDGLWKVMSNQEAVDAIKDIKDARSAAKHLTEAAVNRKSSMISLVLL* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0037 280 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 14 277 - -
Amo03g0037 280 CDD PP2Cc 48 273 IPR001932 -
Amo03g0037 280 PANTHER PROTEIN PHOSPHATASE 2C 14 277 IPR015655 GO:0004722|GO:0006470
Amo03g0037 280 Gene3D - 29 276 IPR036457 -
Amo03g0037 280 SUPERFAMILY PP2C-like 43 272 IPR036457 -
Amo03g0037 280 ProSiteProfiles PPM-type phosphatase domain profile. 47 280 IPR001932 -
Amo03g0037 280 Pfam Protein phosphatase 2C 58 272 IPR001932 -
Amo03g0037 280 SMART PP2C_4 37 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0037 Amo-Chr3 857532 862519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0037 14 280 PP2C-type Phosphatase Gene Family AT3G15260 68.531 5.85e-139 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0037 K17506 - gmx:100787942 422.55