Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0008 ATGACTGGCAGAGAAATCCTCCACAAGATGAAGGAAAAAGTGTTGGGGTCATCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCTAAGAACATAACTCATGGCTTCCATTTGGTAAAGGGAAGATCAGATCATGCTATGGAAGACTATCTTGTTGCTCAATTTAAGCAAGTCGAAAATAATGAGTTGGGTTTGTTTGCAATATTTGATGGCCACTCTGGTCACAGTGTACCTGATTACTTGCGGTCTCATTTGTTCGATAACATCATGAATGAGCCTGACTTCTGGACAGACCCTGCTAATGCTGTGAAGAGAGCCTATAGTGTAACTGATTCTACTATTTTGGAGAAATCAGGCGAATTGGGCAGAGGGGGTTCAACTGCTGTTACAGCAATATTGATTAATTGTCAGAAGCTAATAGTGGCCAACATTGGGGACTCTCGGGCTGTCTTATCGGTGAATGGCAAGGCCAAACAACTATCTGTGGATCATGAACCAAACACAGAATGGGAGGACATCAAGAACAGAGGTGGTTTCGTATCTAACTTCCCAGGGGATGTTCCACGGGTTGATGGGCAATTGGCAGTGTCGAGGGCATTTGGTGACAAAAGCCTGAAGAAACACTTGAGCTCTGATCCATATGTGACAGTGGAGCTCATAGGTGATGGTGCAGAGTTTATCATATTAGCCAGTGATGGTTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATGCTATCAAAGACATAAAAGATGCTCGGTCTGCAGCAAAACACCTTACTGAAGCAGCAGTTAACAGGAAAAGCTCGGATGATATCTCTTGTGTTGTTGTGAGATTTCAGTGA 849 0.4323 MTGREILHKMKEKVLGSSDPDSGKGKSKMSKNITHGFHLVKGRSDHAMEDYLVAQFKQVENNELGLFAIFDGHSGHSVPDYLRSHLFDNIMNEPDFWTDPANAVKRAYSVTDSTILEKSGELGRGGSTAVTAILINCQKLIVANIGDSRAVLSVNGKAKQLSVDHEPNTEWEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSDPYVTVELIGDGAEFIILASDGLWKVMSNQEAVDAIKDIKDARSAAKHLTEAAVNRKSSDDISCVVVRFQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0008 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Amo03g0008 282 Pfam Protein phosphatase 2C 45 274 IPR001932 -
Amo03g0008 282 SMART PP2C_4 24 279 IPR001932 -
Amo03g0008 282 CDD PP2Cc 35 281 IPR001932 -
Amo03g0008 282 Gene3D - 16 282 IPR036457 -
Amo03g0008 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Amo03g0008 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Amo03g0008 282 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0008 Amo-Chr3 245929 251644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0008 1 282 PP2C-type Phosphatase Gene Family AT3G15260 74.740 1.48e-160 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0008 K17506 - gmx:100787942 481.1