Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0001 ATGTTTGACGACGGTAACACGGAATTCACCTTGGATCATTCAGGTCCATTCTACTTCATCAGCGGCCAAGACCAAAACTGTCAGAACAAAGGTCAGAAACTAATCGTTGTTGTCTTGGCGCCACGTGGCACTACACCAACACCGCCTTCACCAAAATCACCCTCACCAACACCAACCCCAACACCAACACCAGCACCATCTGGCTCGCCGCCGGTGCCGGCACCGACACCAGCACCCGCCGGAAATCCTCCGGCGCCTTCCGTTTCACCACCTACACCTACTCCTACTCCTACTCCGGCGACTTCACCGGCTCCGGCGGGGAATTCACCGTCACCATCTCCTGTAAGTGGACCTCCGTCCCCGACTCCGGCGGGTACAACGCCGTCTCCTTCATCTGGATCACCGGGTCCGACGACTTCACCTCCCGTTCCGCCTCCGGCGACACCTCCGGGGGGTGCAGCTCCTGGAACGGCTAATCCGCCAGCTTCAAGTGAAACGGCTCCACCGCCGGGAAAAAATAACGCTTGGGCTGCTACTCCTTCGAAATTCTTGGTGTATTCGGCTACCATTGTTGTTGCTGCTGTGTTCTTCGTTTGA 597 0.5729 MFDDGNTEFTLDHSGPFYFISGQDQNCQNKGQKLIVVVLAPRGTTPTPPSPKSPSPTPTPTPTPAPSGSPPVPAPTPAPAGNPPAPSVSPPTPTPTPTPATSPAPAGNSPSPSPVSGPPSPTPAGTTPSPSSGSPGPTTSPPVPPPATPPGGAAPGTANPPASSETAPPPGKNNAWAATPSKFLVYSATIVVAAVFFV* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0001 198 ProSiteProfiles Phytocyanin domain profile. 1 40 IPR003245 GO:0009055
Amo03g0001 198 MobiDBLite consensus disorder prediction 41 177 - -
Amo03g0001 198 Gene3D - 1 48 IPR008972 -
Amo03g0001 198 MobiDBLite consensus disorder prediction 44 167 - -
Amo03g0001 198 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 2 197 - -
Amo03g0001 198 SUPERFAMILY Cupredoxins 2 39 IPR008972 -
Amo03g0001 198 PRINTS Proline rich extensin signature 79 100 - -
Amo03g0001 198 PRINTS Proline rich extensin signature 46 62 - -
Amo03g0001 198 PRINTS Proline rich extensin signature 66 78 - -
Amo03g0001 198 PANTHER BLUE COPPER PROTEIN 2 197 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0001 Amo-Chr3 68021 69652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0001 2 93 Phytocyanin Superfamily AT5G53870 50.526 2.52e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0001 - - mtr:MTR_2g079030 66.2402