Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2719 ATGGATCCTTCACTCTTAGCAGTTCCTACCGTTTTGCTGTTTTGTGTCCACAAACTGATATCTTTCTGCAAATTCATGATGCAAGTGCTGTTATTCTTCCTGTCCCATTTTCTAGTTCTCTTTGGTCAAGTGATCTCAACAGACACAGTTTTCAATGATGATGTTCTGGGGTTGATTGTGTTCAAAGCTGCTCTACAAGACCCAAATGGGAAACTCACTTCTTGGAATGAAGATGATAACAATCCTTGCAATTGGGTTGGTGTGAAATGTGACCCTTCAACTAATAGGGTAAATGCCCTTGTTCTTGATGGATTCTCTCTTTCTGGCCACATTGATAGAGGCCTATTGAGATTGCAGAACCTTCAGATTTTGTCACTTGCTAGGAACAACTTCACAGGGAGCATAAACCCTGATCTTACCAGCCTTGGGAATTTGCAAGTTCTTGATTTCAGTGAGAACAATCTATATGGACCAATCCCAAATGGTTTTTTCCAACAATGCTGGTCTCTGAGATCAGTTTCATTTGCAAATAACAACCTTTCAGGTAAAGTTCCTGAGTCTTTGAGTTCATGCACTTCATTGGAAACTCTAAACTTTTCCTCTAATCAGCTACATGGTGAATTGCCATCTGGGATATGGTATCTGAAGGGTCTGCAATCATTTGATTTTTCAAGTAACCTGCTAGAAGGAGAGATTCCTGAAGGAATTCAGAATCTGTATGATTTGAAGGAGTTAAGGCTTGGCAAGAACCGACTCTCCGGCCGGCTTCCGGAGGACATTGGAGGCTGCTTGCTGTTAAAGTTTATTGATTTCAGTAATAATTTTCTCTCTGGGAAAATTCCTGAGTCAATGCAAAGGCTCACCTCATGCACATCACTCAGTTTGCAGGGGAATTCGTTCACCGATCACATTCCGGATTGGATTGGAGAATTGAAGAGTTTGGAGATATTGGACCTTTCTAACAACAGATTTTCTGGTTGGATTCCAAAATCAATTGGAAATGTTAATTCACTGAGTGTGTTGAATTTATCCAGGAATGAGATCACTGGGAACATACCAGATTCAATGATAAACTGCAACAAGCTTTTGGTTCTTGACATTAGTCACAATCACATGGCAGGGATCCTTCCTTCATGGATATTCAAGATGGGGTTGCAAAGTATCTCACTTTCTGAAAACAACTTGAGAAAATCCATACCTGTTTCTTATCATGGTCTTCAGATTTTGGATTTGTCATCAAATGCATTTTCTGGCAAAATTCCATTCAGCATTGGAGGACTCAGTAGCTTGCAAGTGTTGAATTTGTCAACCAATAACATCTCTGGCACTATTCCAGTAAGCATAGGAGAACTCAAATCTTTGTACATTCTTGACTTGAGTGGGAACAAGCTCAATGGAAGCATTCCTAATGAAATAGAAGGTGCAGTTTCTCTCAGTGAACTGAGGCTACAAAAGAACTTGTTGAGTGGAAGAATTCCAAGACAAATTGAGAAGAATCTTTCACACAACAAGCTTATTGGTTCAATCCCTGCACCAATTGCAAATCTAACCAATCTTCAGTATTTAGATTTGTCATGGAATGAACTCTCTGGAAGCTTACCAAAGGAGCTAACAAATCTTTCCCAAATTTCATCATTCAATGTTTCTCACAATCATCTTCAAGGAGAGTTACCAGTTGGTGGTTTCTTTGATACCATATCTCCCTCTTCTATCTCTGGTAATCCATTGTTATGTGGTTCTGTCTTCAATCACTCCTGCACCATTGACCATCAAAAACCAATTGTCCTGAATCCGAATTCTTCTTACTCCAACTCAGGAGCATCCTCACAAAATCGCCATCATAAAATCATCCTCAGTATATCTGCACTTATAGCTATTGGTGCAGCTGTTTTCATTGCCATTGGTGTGGTGGTAGTTACTGTCCTAAACATCCATGTGAGGTCCTCAACTTCGCATTCCCCGGCTCAATTTGCATTATCCGGTGGTGGCGACGAAGACTATAGTGGTTCGCCCGCGAAGGATCCAAACTATGGCAAGCTAGTTATGTTTTCTGGCCATGCAGAGTTTGCTGATGGGGCTAATAATCTTCTAAACAAAGACAGCGAAATCGGCCGTGGTGGATTCGGAGTTGTTTATTGCACTGTCCTTCGCGACGGCCGTTCTGTTGCAATCAAGAAGCTTACAATCTCTGGTTTGATAAAGTCACAAGAAGATTTTGAGAAGGAAGTTAAGATCCTAGGGGAGATCAAGCACCAGAATCTTGTAGCACTTGAAGGTTATTATTGGACTTCATCATTGCAGCTTCTTATTTATGAGTATTTATCCAGAGGGAGTTTGCATAAGCTTCTACATGATGAAAATAGCAAGAAAGTTGTGCTTTCTTGGCAACAAAGATTCAAGATTATTCTTGGCATGGCTAGAGGTTTGACCTATTTGCACAAACTCAACATGATCCACTACAATCTAAAATCAAACAATGTTCTAATAGATTGTTCTTATGAGCCTAGAATTGGAGACTTTGGCCTTGTGAGGCTATTGCCAATGCTAGATCATTATGTCTTGAGCAGCAAGATACAGAGTGCACTTGGATACATGGCTCCGGAATTCGCCTGCCGGACGGTTAGGATCACGGAGAAGTGCGACGTGTACGGCTTCGGAGTCCTTGTTCTTGAGGTGGTGACAGGGAGAAAGCCTGTGGAGTACATGGAGGATGATGTGGTTGTGCTTTGTGACATGGTGAGAGGTGCATTGGAAGGAGACAAGTTAGAGCAGTGTGTTGATGAGAGGCTTTTTGGTAATTTTGCAGCAGAGGAAGCAGTTCCTCTGTTGAAATTAGGGTTGGTTTGTGCTTCACAAGTCCCATCAAACCGTCCAGATATGGCTGAGGTTGTCAACATTCTTGAAATGATCCAATGCCCTTCAGAAGGACAAGAAGAAATACAAATAAGTTCTTGA 2955 0.4122 MDPSLLAVPTVLLFCVHKLISFCKFMMQVLLFFLSHFLVLFGQVISTDTVFNDDVLGLIVFKAALQDPNGKLTSWNEDDNNPCNWVGVKCDPSTNRVNALVLDGFSLSGHIDRGLLRLQNLQILSLARNNFTGSINPDLTSLGNLQVLDFSENNLYGPIPNGFFQQCWSLRSVSFANNNLSGKVPESLSSCTSLETLNFSSNQLHGELPSGIWYLKGLQSFDFSSNLLEGEIPEGIQNLYDLKELRLGKNRLSGRLPEDIGGCLLLKFIDFSNNFLSGKIPESMQRLTSCTSLSLQGNSFTDHIPDWIGELKSLEILDLSNNRFSGWIPKSIGNVNSLSVLNLSRNEITGNIPDSMINCNKLLVLDISHNHMAGILPSWIFKMGLQSISLSENNLRKSIPVSYHGLQILDLSSNAFSGKIPFSIGGLSSLQVLNLSTNNISGTIPVSIGELKSLYILDLSGNKLNGSIPNEIEGAVSLSELRLQKNLLSGRIPRQIEKNLSHNKLIGSIPAPIANLTNLQYLDLSWNELSGSLPKELTNLSQISSFNVSHNHLQGELPVGGFFDTISPSSISGNPLLCGSVFNHSCTIDHQKPIVLNPNSSYSNSGASSQNRHHKIILSISALIAIGAAVFIAIGVVVVTVLNIHVRSSTSHSPAQFALSGGGDEDYSGSPAKDPNYGKLVMFSGHAEFADGANNLLNKDSEIGRGGFGVVYCTVLRDGRSVAIKKLTISGLIKSQEDFEKEVKILGEIKHQNLVALEGYYWTSSLQLLIYEYLSRGSLHKLLHDENSKKVVLSWQQRFKIILGMARGLTYLHKLNMIHYNLKSNNVLIDCSYEPRIGDFGLVRLLPMLDHYVLSSKIQSALGYMAPEFACRTVRITEKCDVYGFGVLVLEVVTGRKPVEYMEDDVVVLCDMVRGALEGDKLEQCVDERLFGNFAAEEAVPLLKLGLVCASQVPSNRPDMAEVVNILEMIQCPSEGQEEIQISS* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2719 984 Pfam Leucine rich repeat 405 464 IPR001611 GO:0005515
Amo02g2719 984 Pfam Leucine rich repeat 313 371 IPR001611 GO:0005515
Amo02g2719 984 PRINTS Leucine-rich repeat signature 454 467 - -
Amo02g2719 984 PRINTS Leucine-rich repeat signature 516 529 - -
Amo02g2719 984 Gene3D Ribonuclease Inhibitor 313 589 IPR032675 -
Amo02g2719 984 Gene3D Ribonuclease Inhibitor 52 208 IPR032675 -
Amo02g2719 984 ProSiteProfiles Protein kinase domain profile. 697 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g2719 984 CDD STKc_IRAK 703 968 - -
Amo02g2719 984 ProSiteProfiles Leucine-rich repeat profile. 518 541 IPR001611 GO:0005515
Amo02g2719 984 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 28 972 - -
Amo02g2719 984 Pfam Leucine rich repeat N-terminal domain 52 91 IPR013210 -
Amo02g2719 984 ProSitePatterns Protein kinases ATP-binding region signature. 703 726 IPR017441 GO:0005524
Amo02g2719 984 Gene3D Phosphorylase Kinase; domain 1 676 773 - -
Amo02g2719 984 SUPERFAMILY L domain-like 67 400 - -
Amo02g2719 984 SMART LRR_typ_2 427 449 IPR003591 -
Amo02g2719 984 SMART LRR_typ_2 516 540 IPR003591 -
Amo02g2719 984 SMART LRR_typ_2 335 359 IPR003591 -
Amo02g2719 984 SMART LRR_typ_2 311 334 IPR003591 -
Amo02g2719 984 SMART LRR_typ_2 451 475 IPR003591 -
Amo02g2719 984 SMART LRR_typ_2 191 215 IPR003591 -
Amo02g2719 984 SMART LRR_typ_2 239 263 IPR003591 -
Amo02g2719 984 SMART LRR_typ_2 142 166 IPR003591 -
Amo02g2719 984 SUPERFAMILY Protein kinase-like (PK-like) 699 971 IPR011009 -
Amo02g2719 984 Gene3D Ribonuclease Inhibitor 209 306 IPR032675 -
Amo02g2719 984 SMART LRR_sd22_2 311 337 - -
Amo02g2719 984 SMART LRR_sd22_2 451 474 - -
Amo02g2719 984 SMART LRR_sd22_2 516 542 - -
Amo02g2719 984 SMART LRR_sd22_2 215 238 - -
Amo02g2719 984 SMART LRR_sd22_2 118 147 - -
Amo02g2719 984 Gene3D Transferase(Phosphotransferase) domain 1 774 979 - -
Amo02g2719 984 Pfam Protein tyrosine and serine/threonine kinase 698 907 IPR001245 GO:0004672|GO:0006468
Amo02g2719 984 Pfam Leucine Rich Repeat 518 540 IPR001611 GO:0005515
Amo02g2719 984 SUPERFAMILY L domain-like 385 579 - -
Amo02g2719 984 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 28 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2719 Amo-Chr2 84215997 84219923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2719 37 978 Receptor kinase-like Gene Family AT5G01890 58.316 0.0 1062
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Amo02g2719 PK_Tyr_Ser-Thr 4.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2719 - - gmx:100791204 1434.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2528 12 108802238 108805669 Amo02g2719 02 84215997 84219923 hybridization
Amo14g3049 14 128957529 128961702 Amo02g2719 02 84215997 84219923 PCT
Amo04g2058 04 90358818 90362141 Amo02g2719 02 84215997 84219923 PCT
Amo02g2719 02 84215997 84219923 Amo14g3049 14 128957529 128961702 PCT
Amo02g2719 02 84215997 84219923 Amo04g2058 04 90358818 90362141 PCT