Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2701 ATGAAGGCGATGCCCTTTCCTTCTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCTTCTTATTGTTCTGCGACAGATCTGTTCTCACTGCTTCAGCATCAACAGCAACTTGTTAATAATCATAGTATCCATCAGCCACCACCACCACCACAAGAAGAAGAAGAAAAGTGGAGGAGACGGGAAGAAGAAGAAGAAGAGAACAAAGGCTATGTGGGCTGCACTGAGCCCACATCTGTTCTTGACTCAAGAAGAAGCCAAAGCCCTCCTTCATCCTCCTGCACAATGTCCTCTTCTCTTGGTAGCAGCAACAACAGCACAAGCAAAGGTAGTGCTGGTGGTGGTGGTGGTGGCTGCTCAGCTTCTGCTGCAGCACTCACCTCAGAGAACCCTCCTCCTCCTCCTCCAGAAGGATCCATGGAGAAATGTGGCGGTACAAGAATGATGGATGACTGGGAGGGTCAAGATCAGTCCATTCTGAGGTTAATCATGGGTGATGTTGAGGACCCTTCTGCTGGTTTGACCAAGCTCTTGCAAACTGGCTCTCACAATGTTGATTTCAGTTCGGGAGGGTTTGGTGTTGTGGATCAAGGAGGCTTGATTATGGACCCTTCTGTGCCAGGGAATTATCCTGCTTTCCCATTCCTTGGGGCYGAGAATACGGATGGTCACRTTGCAAAGACCGGTGGGGTTGCTGAACCCATGTTTTCATCCGGTAACAATCCTATGTTAGCCTCCACATCTCCAGCTGCAGGTGTGTTTGGCTCTCAGCAGCCTGTGTTTGGAATTGTGGATGAGAAGCCTCAGGTTATCAACCCTCAGTTTATGATGAATCATAATCAAGTTCAGTTTTCAGAGAATCCTTCATTCTTTGTGCCATTGACATACCCCCAAATGCAAGAGCAACATGTTGTTTACTCTCAGCAACCAGCGAAGCGCCCTCTTTCWRATGCARCCGTCGGTCACAATTATCAGGTGCCGAGATTACCCCTTTTGGATTCGGGGCAGGAGCAATTTGCTAGGAGGCAGCAGCAGGCCCAGCTTCCTTTGTTTCCTCATCATAGTCAGCAGCAGAAGGTGAGTTCTGCCGGAGACGAGGCGAGCAACCAGCTTCAGCAGGCTATGTTTGACCAGCTTTACAAGACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCGATCGGCAAGCCTTTTCAAAGGGCTGCTCTCTACATGAAGGAGGCATTGCAACTACTGCCCCATTCAAACATCTCCAATTTAACGGCTTTCTCACCTATCAGTTTCATATTCAAAGTTGGAGCTTATAAATCATTTTCAGAGATATCACCGGTTCTCCAGTTTGCAAACTTCACYTCTAATCAAGCCCTCATCGAAGCTGTAGAAAGGTTCGATCGAATTCACATTATTGACTTCGATATTGGGTTTGGAGTGCAGTGGTCTTCTTTTATGCAAGAGCTTGCCTTGAGAAATAGCGGTGCATCTTCTCTTAGAGTTACTGCCGTGGTATCGCCCTCAACCTGCGATGAGGTTGAGCTCAGTTTTACAAGAGAGAATTTAAGTCAATATGCAAAAGACATTAACTTATCATTTGAGCTCCATATCTTGAACATCGAATCATTGAGCTCTCCGTCCTTTCCCCTGGCTGGTCAATTCTTCGATAACGAGGCAGTTGCTGTAAATATGCCACTTTCTTGTTTCACTCATCATCCATCACTGGTTCCATCGGTCCTTCACTTTGTCAAGCAGCTTAGGCCAAAAGTGGTGGTTACTTTGGGCAGGAATTGCGACCGAAACGATGTGCCTCTTCCAACCAAGGTAGTCCATGTTCTTCAATATTACTCAGCCTTGCTCGAGTCGCTTGATGCTGTGAATGTGAACCTAGATGTCCTCCAAAAGATTGAGAAGCACTTCATCCAACCATCTATTAGAAAAGTAATCGTGGGTCACCACCATTATCATTCACAAGAAAAGCTACCTCATTGGAGGAACCTCTTTGCTCAATCAGGATTCTCATCGTTCACATTCAGTAACTTCACAGAAGCTCAAGCAGAATGTCTGGTGCAGCGTGCGCCCGTGCGGGGATTTCAAGTGGATCGAAATCATTCCTCTCTTGTTCTATGCTGGCAGCGAAAAGACCTCGTGTCCATCTCGCTTTGGAGATGCTAA 2211 0.4699 MKAMPFPSEEFQGKGVLDFSSSYCSATDLFSLLQHQQQLVNNHSIHQPPPPPQEEEEKWRRREEEEEENKGYVGCTEPTSVLDSRRSQSPPSSSCTMSSSLGSSNNSTSKGSAGGGGGGCSASAAALTSENPPPPPPEGSMEKCGGTRMMDDWEGQDQSILRLIMGDVEDPSAGLTKLLQTGSHNVDFSSGGFGVVDQGGLIMDPSVPGNYPAFPFLGAENTDGHXAKTGGVAEPMFSSGNNPMLASTSPAAGVFGSQQPVFGIVDEKPQVINPQFMMNHNQVQFSENPSFFVPLTYPQMQEQHVVYSQQPAKRPLSXAXVGHNYQVPRLPLLDSGQEQFARRQQQAQLPLFPHHSQQQKVSSAGDEASNQLQQAMFDQLYKTAELIEAGNPVLAQGILARLNHQLSPIGKPFQRAALYMKEALQLLPHSNISNLTAFSPISFIFKVGAYKSFSEISPVLQFANFTSNQALIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSGASSLRVTAVVSPSTCDEVELSFTRENLSQYAKDINLSFELHILNIESLSSPSFPLAGQFFDNEAVAVNMPLSCFTHHPSLVPSVLHFVKQLRPKVVVTLGRNCDRNDVPLPTKVVHVLQYYSALLESLDAVNVNLDVLQKIEKHFIQPSIRKVIVGHHHYHSQEKLPHWRNLFAQSGFSSFTFSNFTEAQAECLVQRAPVRGFQVDRNHSSLVLCWQRKDLVSISLWRC* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2701 736 MobiDBLite consensus disorder prediction 40 151 - -
Amo02g2701 736 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 7 735 - -
Amo02g2701 736 MobiDBLite consensus disorder prediction 344 368 - -
Amo02g2701 736 MobiDBLite consensus disorder prediction 50 72 - -
Amo02g2701 736 Pfam GRAS domain family 378 735 IPR005202 -
Amo02g2701 736 MobiDBLite consensus disorder prediction 80 114 - -
Amo02g2701 736 ProSiteProfiles GRAS family profile. 367 735 IPR005202 -
Amo02g2701 736 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 735 IPR005202 -
Amo02g2701 736 MobiDBLite consensus disorder prediction 225 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2701 Amo-Chr2 83853927 83857180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2701 378 736 GRAS Transcription Factor Family AT4G00150 53.186 3.86e-121 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo02g2701 GRAS 2.8e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2701 - - aip:107625898 1313.52