Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2688 ATGCCACCACTAATTCTTTTAGTACTATATCTTACTCTTCCTTTGTTTCTCTTTTTCCTTGTCCGAAACCTTATGAACCCTAATAAGAGCAAAACCCTACCACCAGGTCCCAAAGGCCTTCCCATAATTGGCAACCTTTACAAGCTAGATAACTCAGTTCTTCACCTTCAGCTATGGAATCTCTCGAAGAAATTCGGGCCAATATTCACCCTTTGGCTAGGGTTTAGGCCTGCCATCATTATTTCATCGCCTCAACTGGCCGAAGAGGCGATGAAAATACAAGACCCTAAGTTTTGTGGAAGGCCTAAATTCGTTGCACAACAAAGAATTTCTTATAATGGGATCGAGATGGCATTTTCGCCATACGATAATTGTTGGAAAGAGATCAAGAAAATTTGTGTTTCTAATGTCCTTAGCCCTAGGCGCATCGCCGGATATTACTCGATAAGGAAAGAAGAGGTGAAGAAGATGATGAAGAAGATACAACAGCATGCAACTTCATCGGAAGTTGTAAATTTGAAGGATCCACTCCTCAACCTTATGATGAATCTTGTATGCAAGATTGTTCTAGGGAGGACTTATGAAGATGAAGGGCCTGAGAGGGAAAGGTTTCTTAGTTTGTTTGATGAGTGTAATGCTTGGTTGGGAACCTACTTTCTCTCAGATTATTTTCCATTTCTGAGCTGGATCGATAGGATGATGGGACTCCATTCGCGTCTCGATAAGAACTTCAAGGAGTTGGATGAGTTCTACCAAGAAATCATTGATGAACACTCGGATCCTAATAGGAAGGTTTTGGAGGGAGAGGAAGATGTAACTCATATCTTGCTTCAAATGCAAAAGGATCATTCAACGTCCATGGACCTCACTAATGATCATGTCAAAGCAATAATCATGGACATACTTGTTGGAGCAACGGATACAACTGCGGCCACAACGGTTTGGATCATGACAAATCTAATAAAAAACGCAAGAGTGTTGAAGAAAGTTCAAGAAGAAATTAGGAGCTTGGGAGGGAAGAAAGATTTCTTGGAAGAAGATGAGATTCAAAAGTTTACATATTTCAAAGCCGTTATAAAAGAATCACTAAGATTGCATCTTCCAGCACCTATAATTCCAAGAGCCACACATGAAAGTTGCAACATTGGTGGATACCAAATTCCACCCAACACACTTGTTTATGTGAACACTTGGGCTATCCATAGAGACCCTCAATCTTGGAAGGACCCAGAAGAATTTTATCCAGAAAGATTCTTAGACAATGATATCAACCTTCGAGGGCAAGATTTCAAGCTTTTTCCATTTGGTTCAGGTCGTAGAATGTGCCCTGGTTTGCCTTTAGCAACTGCAGCGCTTGATCTTATTCTTGCTAATCTTTTAAATTCCTTTGATTGGGAATTGCCAGAAGGAATCAAAAGGGAAGACATTGATTATGAAAGGTTACCAGGAATTGCTCATCACAAGAAGAATCCTCTCTATCTTATCGCAAAGACCCACATATAA 1503 0.4025 MPPLILLVLYLTLPLFLFFLVRNLMNPNKSKTLPPGPKGLPIIGNLYKLDNSVLHLQLWNLSKKFGPIFTLWLGFRPAIIISSPQLAEEAMKIQDPKFCGRPKFVAQQRISYNGIEMAFSPYDNCWKEIKKICVSNVLSPRRIAGYYSIRKEEVKKMMKKIQQHATSSEVVNLKDPLLNLMMNLVCKIVLGRTYEDEGPERERFLSLFDECNAWLGTYFLSDYFPFLSWIDRMMGLHSRLDKNFKELDEFYQEIIDEHSDPNRKVLEGEEDVTHILLQMQKDHSTSMDLTNDHVKAIIMDILVGATDTTAATTVWIMTNLIKNARVLKKVQEEIRSLGGKKDFLEEDEIQKFTYFKAVIKESLRLHLPAPIIPRATHESCNIGGYQIPPNTLVYVNTWAIHRDPQSWKDPEEFYPERFLDNDINLRGQDFKLFPFGSGRRMCPGLPLATAALDLILANLLNSFDWELPEGIKREDIDYERLPGIAHHKKNPLYLIAKTHI* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2688 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 SUPERFAMILY Cytochrome P450 34 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 Coils Coil 327 347 - -
Amo02g2688 500 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 PANTHER CYTOCHROME P450 71B11-RELATED 4 499 - -
Amo02g2688 500 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 499 - -
Amo02g2688 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Amo02g2688 500 Pfam Cytochrome P450 34 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2688 500 Gene3D Cytochrome P450 26 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2688 Amo-Chr2 83644031 83646307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2688 5 500 Cytochrome P450 AT4G31500 44.930 2.08e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2688 - - gmx:100801312 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2623 12 110747340 110750120 Amo02g2688 02 83644031 83646307 hybridization