Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2687 ATGTTGCCACCACTTGATCTAAGTCTATATCTTATTATTCCCTTGTTTGTGTTTCTTTTCATCCGAACCCTAAAGAAAAAATCCCTTAAATCACTACCTGGTCCTAAAGGCCTTCCCATAATAGGGAACCTTCATCAATTAGATAATTTAATCCTTTATAAGCAACTATCTCAACTCTCTAAGAAACATGGCCCTATATTCTCCCTTAAACTAGGGTTAAGGCGTGCCATTGTTGTTTCCTCATCAAAACTAGCCAAAGAGACACTAAAAAACCATGACATTGTTTTCTCCGGAAGGCCTAAGTTACTAGGGCAACAAAAATTGTCCTACAATGGCTTAGATATTGCGTTATCCCAATATGGTGATCATTGGAGAGAAGTTAGAAAGATTGGTGTTACCCATGTTCTTAGTGCTAGGCGTGTATCAAGCTTTTCCTCAATAAGAAATTTTGAGATACAAAAAATGATAGAAAAAATATCTACTCATGCTTCATCATCATCATCTTCAAAAGTTGTAAACTTGAGTGAGATGTTGGTGTCTCTTAATAGCACTATTATATGTAGGAGTGCTTTTGGGAGAAGGTATGATGATAATGAAGGAGTTGAGAGGAGTAGGTTCCATGGTTTGTTCAATGAGTTACAAGCTGTTGTGGCTGCTAATTTTGTTTCGGATTATATTCCTTTCTTGGGTTGGATTGATAGAWTCAATGGGATGCATAAACGTCTTGAAAGAATTTTTAAGGAGATGGATAGTTTCTATCAAGAAGTCATTGATGAACACATGGATCCCAATAGAAAGACTTTGAAGGATAAGGGAGAAGAAGACATGATTGATGTCTTGCTTCAATTGAAGAAGGAGCGTTCATCTTCCATTGACATCACCTATGATCACATCAAAGCATTGGTCATGGATATGCTTGTAGCGGCAACAGACACTACTTCAGCTACAACTGTTTGGGCTATGTTTGCCCTAATGAAAAACCCAAGAGTTCTAAAGAAAGTTCAAGAAGAAATTAGAAACCAAGAAATCAAGAAAGATTATTTAGAAGAAGATGATATTCAAAAGTTTACCTATTTTAAGGCTTTTATAAAAGAGGTACTTAGGTTGCATCTTCCAGCACCACTCCTTGTGCCAAGAGAAACAACTCAACATTGCATTATAGATGGCTATGAAATTCCAGCCAAGACAATAGTTTATATAAATGCATGGGCTATACATAGAGATCCGGAAATTTGGAAGGATCCGGAAGAGTTCTATCCTGAAAGGTTCCTCGAAAATCATATCGATTTTCGAGGGCAAGATTTCGAGTTGATTCCGTTCGGTTCGGGTAGAAGAATTTGCCCTGGATTGCATATGGCAGTTACAACACTTGATCTAGTCCTTGCTAATCTTTTATATTCTTTTAACTGGGAATTGCCTTTGGGAGTGAGAAAGGAAGACATTGATACTCAAGTATTGCCTGGACTTGTTCTACATAAGAAGAATCCTCTTTGCCTTGTTGCAAAGAGACACATATAG 1518 0.3722 MLPPLDLSLYLIIPLFVFLFIRTLKKKSLKSLPGPKGLPIIGNLHQLDNLILYKQLSQLSKKHGPIFSLKLGLRRAIVVSSSKLAKETLKNHDIVFSGRPKLLGQQKLSYNGLDIALSQYGDHWREVRKIGVTHVLSARRVSSFSSIRNFEIQKMIEKISTHASSSSSSKVVNLSEMLVSLNSTIICRSAFGRRYDDNEGVERSRFHGLFNELQAVVAANFVSDYIPFLGWIDRXNGMHKRLERIFKEMDSFYQEVIDEHMDPNRKTLKDKGEEDMIDVLLQLKKERSSSIDITYDHIKALVMDMLVAATDTTSATTVWAMFALMKNPRVLKKVQEEIRNQEIKKDYLEEDDIQKFTYFKAFIKEVLRLHLPAPLLVPRETTQHCIIDGYEIPAKTIVYINAWAIHRDPEIWKDPEEFYPERFLENHIDFRGQDFELIPFGSGRRICPGLHMAVTTLDLVLANLLYSFNWELPLGVRKEDIDTQVLPGLVLHKKNPLCLVAKRHI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2687 505 Pfam Cytochrome P450 33 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 Gene3D Cytochrome P450 24 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 Coils Coil 331 351 - -
Amo02g2687 505 PANTHER CYTOCHROME P450 71B11-RELATED 6 504 - -
Amo02g2687 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Amo02g2687 505 SUPERFAMILY Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g2687 505 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2687 Amo-Chr2 83633988 83636361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2687 7 505 Cytochrome P450 AT4G31500 45.850 1.24e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2687 - - gmx:100800236 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2633 12 111009404 111028936 Amo02g2687 02 83633988 83636361 hybridization