Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2672 ATGTCTTCAAGGGGGAGAAAAAAAGCAGCTATGCAACGCATGTTGCAACAGCTTCGAACCGCCACAAATTCCAGTGCTATGAACAAAGCCTCTATTATTGTTGACGCCACCAAATACATGGAAGAGTTGAAGCAAAAAGTGGAGGGAATTAACTCAGAGCTAGGAACCGTTGGATCTTCATCATCAACCTCCCAAGATGAATTACCAATGGTCACGGTAGAAACCCTAGAAAGGGGTTTTCTTATTAATGTGTTTTCAGAAAGGAATTGCCCCGGTATGCTTGTGGCAATACTTGAGGCCTTTGAAGAACTGGGTCTTGATGTTCTTGACGCTAGGGTTTCTTGTGAAGACAATTTCCAGCTTGAAGCTGTGGGAGGAGAAGGTCAAGATCAGAAGGAGAGCATCGATGCGCAAGTGGTAAAGCAAGCAGTGTTGCAAGCAATCAATAACATGAATTAA 459 0.4357 MSSRGRKKAAMQRMLQQLRTATNSSAMNKASIIVDATKYMEELKQKVEGINSELGTVGSSSSTSQDELPMVTVETLERGFLINVFSERNCPGMLVAILEAFEELGLDVLDARVSCEDNFQLEAVGGEGQDQKESIDAQVVKQAVLQAINNMN* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2672 152 CDD ACT_UUR-ACR-like 91 148 - -
Amo02g2672 152 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 152 - -
Amo02g2672 152 Coils Coil 33 53 - -
Amo02g2672 152 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2672 Amo-Chr2 83415038 83417629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2672 25 146 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 27.820 3.14e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2672 - - aip:107628501 282.722