Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2662 ATGGAGCCTCGAGTTGGAAATAAGTTCTGTATCGGTCGGAAAATTAGTAGCGGATCCTTTGGAGAGATCTATTTCGTTTTTCCGATTAGGGAAAATGGTGATGATGACGATAGGAAGACAAAGAAGGGGCAATATGAAGGTCCTAATCCGGACTTAGCTGAGATGCTCGAAAGGGACGTGTTGGAGACGTCTCCCGGAGTGAGATGGGATGATGTTGTAGGCCTCACTGAAGCTAAGAAGCTTCTTGAAGAAGCTGTTGTCCTTCCATTATGGATGCCTGAGTATTTCAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGCAGTACCACTTTCTTTAATGTTTCTTCCGCAACTTTAGCTTCCAAATGGCGTGGTGAGAGTGAATGGATGGTGCGGTGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTATTATTTGATTTCTGATCGAGTTGCATTTCAATTCATCAGGACTTTTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTTTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATAAAGATGGTACCTGTAAAATAATAATGGTGGCCCCTGATGTCAATATAGATGATGTGGCTCGCCGTACAGAAGGTTATAGTGGAGATGATTTGACAAATGTATGTCATAGTGGGAAAACACGCGATGAGATCAAGAACATGCCCAAGGATGAGATTTCAAAGGATCCTGTTGCTATGTGTGAATTTGAGGAAGCTTTGAAGAAAGTCCAGCGAAGTGTTTCTCAGGCTGACATCGAACGTCATGTTTTATTACCATGTTTTATTTTCTTTCCTTGTAACCAATGA 876 0.411 MEPRVGNKFCIGRKISSGSFGEIYFVFPIRENGDDDDRKTKKGQYEGPNPDLAEMLERDVLETSPGVRWDDVVGLTEAKKLLEEAVVLPLWMPEYFKTLLAKAVATECSTTFFNVSSATLASKWRGESEWMVRCLFDLARAYAPSTIFIDEIDSLYYLISDRVAFQFIRTFGEHESSRRVKSELLVQVDGVNNSSTNKDGTCKIIMVAPDVNIDDVARRTEGYSGDDLTNVCHSGKTRDEIKNMPKDEISKDPVAMCEFEEALKKVQRSVSQADIERHVLLPCFIFFPCNQ* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2662 291 Gene3D - 64 97 IPR027417 -
Amo02g2662 291 PANTHER AAA DOMAIN-CONTAINING 97 207 - -
Amo02g2662 291 Pfam AAA+ lid domain 210 232 IPR041569 -
Amo02g2662 291 CDD AAA 97 167 - -
Amo02g2662 291 Pfam ATPase family associated with various cellular activities (AAA) 97 199 IPR003959 GO:0005524|GO:0016887
Amo02g2662 291 PANTHER AAA DOMAIN-CONTAINING 36 97 - -
Amo02g2662 291 PANTHER AAA DOMAIN-CONTAINING 207 278 - -
Amo02g2662 291 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 36 97 - -
Amo02g2662 291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 276 IPR027417 -
Amo02g2662 291 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 97 207 - -
Amo02g2662 291 Gene3D - 98 196 IPR027417 -
Amo02g2662 291 Pfam Vps4 C terminal oligomerisation domain 240 278 IPR015415 -
Amo02g2662 291 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 207 278 - -
Amo02g2662 291 Gene3D - 204 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2662 Amo-Chr2 83187492 83189815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2662 58 270 Calmodulin-binding Proteins AT3G56690 29.123 3.31e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2662 K07767 - rcu:8271350 367.851