Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2660 ATGGTTCAAAAAATTAGGATTCAGTTAAACGAAAACATAAACCATGATCATTTCTCTATGAACGGCGCCGACACAACCAAGAACGCAACCCCTCTCGCCGACGTTACTATCTCATCTTCTCACTGGCTCGTCTGCACTGGTGAACGCCCAGAAGCGCGTTCCCAGCGTGTGGCTCCTTCTGGCTGCACCGCTTCAAGTCTACCTACCCAGCCGGCCTGTGGTCTATTCGGTTTATTCATCGCCATGCCAAGATTGGATGTTACTGAAGTTGGAAGTGTAGAGATGGATATTTGTTACGAGGACATGCCGCTTTTGGATCCTTTGCAGGTTGGAAGTGAAGAGATGGATCCTGGTCACCAGGTACCGGATCATGATGGCCTTCGGGAAGATGAAATACCATGTGTTGGAATGTGGTTTGAGCAATTACAAATGGCTCATGAATTCTATGTGACATACGCAAAGAAAGTCGGGTTTGCGACTAAGATACGGACGACAACCTGTGATAATATCACAAATCAACCCATTAACCAAGCTATTCACTATAATAGAGATGGGTTCTGTGTGTCTCGTGTCAAAGCGTCAACGCGGAAGAACAGGATCTCAGCTGCTAGGTGCAAGGCAAGGATATATGTGAAGTATGACAAGGAGACACAAGACTGGTTTTTCTTCAAGGTGGAGTTGAGTCACTCGTATCCATGTTCAGCGAGAAAGGCGGTGCACTACCATGAGTATAGGAAGCTCACCATGCATGCGAGGTGCAAACAAAATTCACGGTTTTTTTATAGGAATGACATATATGATATCATCTATCTCTTTGATGATCAACACATGTGGGTCCCAATATTTTTCAAGGGTGAATTTTGGACTGCCATGAGGAGCACACAAAGGAGTGAGAGCATGCACTCATTCTACGGAAATTTCTTACACAGTCGGACTAGCTTGGTCCAATTTGTTCACGAATATGACAATGTGCTTGGAATTAAGGAGCAAAGGGAACTGGAGGATGATGCAGCAGACTTGAGGGGGCAGGAGTACACTACCTGCATGTTTAGAGATGTTCAAATTGAGTTTGTCAAGAAGGCTAATTGTAAGATCTCTGTTGTTGCTGAAGAGGGGCCAGTGGTATGCATGAAGGTTGAAGAGGAAAAACTAGTGAATGATACTATTCTTTGTGTTTCGTATGACGTCCACTTCGATCGATCCACACAGGAGGTTCGTTGTGAGTGCAATCTATTTGAGAGTTCAGGAGTGTTATGCTGTCATTATCTTGAAGTCTTCCATTCTTACAAGGTGTATAAAGTACCTAATCGATATGTTCTCCCTCGTTTGAGCAAGAACATAAAGCGCAAGCATACTTATGTCAAGAGTAGTCATGACATCAGTCGGTCGGATGAGAGTCATGATTTTGTAAACGACGATGAAGAAACAGCCTTGCTTCATGCTGCGCTGGAAGAAACAAGAGCTAAGCTGACTGCTCACCGTGTCAAGAAGGGGTCCGAGACTGTGGTGGACTCCCATAACAATAATGGCTCAACAAGTTTGAACGTTGCCACTGTGATGGACATCCAAGCCCCATCGAAGGTCAACACAAAGGGCCGGCCAAATAGTAAGAGGCTCGGCGCTGCCCTGGAGAAGTCATTTAAAAAATCTGCTCGGAGGAAAAACAAGCATGACCCCCCGGTGGTTTGTCCAGAGTCAACTCAAGATGTAAGATTCGGTGGTGTTGTAGTGGAAGAGGCTGGTTTCATGGGGTAA 1755 0.453 MVQKIRIQLNENINHDHFSMNGADTTKNATPLADVTISSSHWLVCTGERPEARSQRVAPSGCTASSLPTQPACGLFGLFIAMPRLDVTEVGSVEMDICYEDMPLLDPLQVGSEEMDPGHQVPDHDGLREDEIPCVGMWFEQLQMAHEFYVTYAKKVGFATKIRTTTCDNITNQPINQAIHYNRDGFCVSRVKASTRKNRISAARCKARIYVKYDKETQDWFFFKVELSHSYPCSARKAVHYHEYRKLTMHARCKQNSRFFYRNDIYDIIYLFDDQHMWVPIFFKGEFWTAMRSTQRSESMHSFYGNFLHSRTSLVQFVHEYDNVLGIKEQRELEDDAADLRGQEYTTCMFRDVQIEFVKKANCKISVVAEEGPVVCMKVEEEKLVNDTILCVSYDVHFDRSTQEVRCECNLFESSGVLCCHYLEVFHSYKVYKVPNRYVLPRLSKNIKRKHTYVKSSHDISRSDESHDFVNDDEETALLHAALEETRAKLTAHRVKKGSETVVDSHNNNGSTSLNVATVMDIQAPSKVNTKGRPNSKRLGAALEKSFKKSARRKNKHDPPVVCPESTQDVRFGGVVVEEAGFMG* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2660 584 PANTHER OS03G0843700 PROTEIN 118 246 - -
Amo02g2660 584 PANTHER OS03G0843700 PROTEIN 268 504 - -
Amo02g2660 584 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 118 246 IPR031052 GO:0006355
Amo02g2660 584 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 268 504 IPR031052 GO:0006355
Amo02g2660 584 ProSiteProfiles Zinc finger SWIM-type profile. 394 430 IPR007527 GO:0008270
Amo02g2660 584 Pfam FAR1 DNA-binding domain 147 233 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2660 Amo-Chr2 83170845 83176463 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g2660 FAR1 5.4e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2660 - - ahf:112732819 522.702