Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2640 ATGGAAGAGGTCAATTGTCAGCTTTGGACTCCCATAGATGGTGAATTTGATGACTACATCATTAATCCAAAACCTAGTGGCTATCAGTCCTTGCACACTGCAGTACAAGGTCCTGATAACTCATTCCTTGAAGTACAAATAAGAACACAGAGGATGCATGAGTATGCTGAACATGGAAATTCTGCACCTTGGCTGTATAAGGAAACTGGAAATCCTTTGTCATCAATAGACAGCATGGATAAACCTAAAACAGAAGAATCCTATTTCTCCAAGGATATAGAAGATGGGAATTCTTCGGATATTTTGTTAAATGTTGAAAAGGATGAAAGAGAATTGTTAGTTGCTGTCAGCTTTGGGCTTGCAGCTTCTGAAGCACGATGGGAAGCTTATGCACAACAAATTGATGAGAAAGAGGAGGCCCGTGATGAAGATGATGATGGTGATGATGATGTTCAGTGGCAAACGGATACATCTATTGATGCTGCTCGTCAACGTATCCAAGAACAGTTAAGTGCTGTGACTACTGATATGGTCATGCTCTCGACAAATGAACCAGAGAAGAAGAAGAAGAAGACAGAAAGCAAGGGTTCTGAGAATGGTGACACTGTGAACTATGCAACTGTGGTCAGGAAAGTGAAAGCATATTTGAAAAAAGGTGTTGCAGTGAAGGAATTGCAGTCACATATTGCTGCATTTCCTGTATCTGCTCAGGAGAAGATGAATGCACTTCTTGAAGGATTATTTGATGGTGTCGAAAAAGCGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGCTGCAGTTCCTGGAGATGACGAGGGTTTGCAGCTGTTATTGCTCAATGCTGTTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGCATTGAATGAGGTTGCACTTATTCTGAAAGCCCTMTATGATGTTGATTTGGTGGAGGAAGAGCACGTCGTGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAGATATGGAAGAATGCTCAACCATTTATTGATTGGCTTCGGAATGCTGAATCAGAATCGGAGGAAGATGAGAAAAATTACATGAATTTTGTTGGTAAGGAGGATGGTGATGTTGTGGCGATGGAAGGAGAGGCGTTTGGCCACTTCAACCGTTGA 1155 0.4182 MEEVNCQLWTPIDGEFDDYIINPKPSGYQSLHTAVQGPDNSFLEVQIRTQRMHEYAEHGNSAPWLYKETGNPLSSIDSMDKPKTEESYFSKDIEDGNSSDILLNVEKDERELLVAVSFGLAASEARWEAYAQQIDEKEEARDEDDDGDDDVQWQTDTSIDAARQRIQEQLSAVTTDMVMLSTNEPEKKKKKTESKGSENGDTVNYATVVRKVKAYLKKGVAVKELQSHIAAFPVSAQEKMNALLEGLFDGVEKAFGKEATKRKNHLAAAVPGDDEGLQLLLLNAVEEFCYKKGSNALNEVALILKALYDVDLVEEEHVVHWYSKGLKGDKKDSQIWKNAQPFIDWLRNAESESEEDEKNYMNFVGKEDGDVVAMEGEAFGHFNR* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2640 384 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 139 356 IPR045196 GO:0003743|GO:0006413
Amo02g2640 384 SUPERFAMILY Nucleotidyltransferase 7 71 IPR043519 -
Amo02g2640 384 CDD NT_Rel-Spo_like 7 57 IPR007685 GO:0015969
Amo02g2640 384 Pfam eIF4-gamma/eIF5/eIF2-epsilon 278 356 IPR003307 GO:0005515
Amo02g2640 384 CDD W2_eIF5 208 354 - -
Amo02g2640 384 Gene3D Beta Polymerase, domain 2 1 50 IPR043519 -
Amo02g2640 384 SUPERFAMILY ARM repeat 204 350 IPR016024 -
Amo02g2640 384 Gene3D - 200 367 - -
Amo02g2640 384 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 139 356 - -
Amo02g2640 384 SMART RelA_SpoT_2 1 70 IPR007685 GO:0015969
Amo02g2640 384 MobiDBLite consensus disorder prediction 182 197 - -
Amo02g2640 384 Pfam Region found in RelA / SpoT proteins 7 70 IPR007685 GO:0015969
Amo02g2640 384 MobiDBLite consensus disorder prediction 181 200 - -
Amo02g2640 384 SMART 542_3 263 352 IPR003307 GO:0005515
Amo02g2640 384 ProSiteProfiles W2 domain profile. 195 356 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2640 Amo-Chr2 82750091 82752085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2640 153 349 Eukaryotic Initiation Factors Gene Family AT1G77840 49.268 1.29e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2640 K03262 - aip:107619007 293.508