Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2632 ATGGGAAATGCTTGTATGTGTCAAGTTTCTATTGGACGAAAAGTGTATGATGCTGATGACTCTGATTCAAATAATTCAAATGATTATTTACCATATAGATATGGACATTGTGGAGCCAAGGTTATGTTAAGTGGATCCTCTAAATTTGTATCAATGTATTCCCAAAAGGGTGAAAAAGAAGTGAATCAAGATGCAATGACAGTTTGGGAGAATTTCACTGGAGAAAAAGACATGATATTTTGTGGTGTGTTCGATGGTCATGGTCCTCAAGGGCACAAATATGCACAAACCATATGCAATAATCTTCCTTCAAAACTCTCCACATCAATCAAAATGTCACAGCAAATTAGTAAGAGCCAACTTGGATTGGATATCAATGGTGATGAAAACCAAAACATGCCTTGTGTTTCATGGGAGGGAAGCTTTTTGAAGTCTTTTAGTGAAATGGATAGAGATCTTGCTCAGAACGTTTACATTGGTAGCTTTAGTGGCGGTAGCACTGCTGTCACTATAGTTAAGCAGTTGATAATTGGTAATTTAGGAGATTCTCGTGCAATTCTTTGCACAAAAACAGATGACAATTTTCGAATTCCTATTCAACTTACCGTTGACCTAAAACCAAATATTCCAAGTGAAGCTTCAAGAATAACTAAGTGTGGAGGCAGAATCTTTCCATCAAAAGATGATCCAAGTGGTATAAATAGAATATGGATGGCTGAAGAAGATTGTCCTGGCTTGGCTATGACAAGATCATTTGGAGATTTCTGCCTAAAAGATTATGGTCTCATCTCAGTTCCTGATGTAATCTATAGAAGAATTAACAAACAAGATGAATTTGTGGTTTTGGCCTCTGATGGAATATGGGATGTGCTAACAAATGAAGAAGTAATTAACATAATTAGTTCAGCAAGAAAGAGGTCAGAAGCAGCAAAAACATTAGTAAAGCATGCCCTTCAAGCCTGGAAAGTCAAGTGTCCTAATGCTGCAGTTGATGATTGTACAGCTATATGTTTGTTCCTGAATAATTAA 1029 0.3654 MGNACMCQVSIGRKVYDADDSDSNNSNDYLPYRYGHCGAKVMLSGSSKFVSMYSQKGEKEVNQDAMTVWENFTGEKDMIFCGVFDGHGPQGHKYAQTICNNLPSKLSTSIKMSQQISKSQLGLDINGDENQNMPCVSWEGSFLKSFSEMDRDLAQNVYIGSFSGGSTAVTIVKQLIIGNLGDSRAILCTKTDDNFRIPIQLTVDLKPNIPSEASRITKCGGRIFPSKDDPSGINRIWMAEEDCPGLAMTRSFGDFCLKDYGLISVPDVIYRRINKQDEFVVLASDGIWDVLTNEEVINIISSARKRSEAAKTLVKHALQAWKVKCPNAAVDDCTAICLFLNN* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2632 342 Pfam Protein phosphatase 2C 63 319 IPR001932 -
Amo02g2632 342 Gene3D - 43 342 IPR036457 -
Amo02g2632 342 CDD PP2Cc 49 340 IPR001932 -
Amo02g2632 342 ProSiteProfiles PPM-type phosphatase domain profile. 49 340 IPR001932 -
Amo02g2632 342 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 342 - -
Amo02g2632 342 PANTHER ALPHABET, ISOFORM E-RELATED 1 342 - -
Amo02g2632 342 SUPERFAMILY PP2C-like 45 342 IPR036457 -
Amo02g2632 342 SMART PP2C_4 43 338 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2632 Amo-Chr2 82608499 82611714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2632 38 342 PP2C-type Phosphatase Gene Family AT5G01700 49.351 2.25e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2632 - - cam:101501265 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2416 12 106621054 106624676 Amo02g2632 02 82608499 82611714 hybridization