Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2598 ATGGAAGAAAGCCATGGATCCCAATGTTCCAAGACAAGCCCTTCAAACCTTGAGGAGGAAGAAGAAGACGACGACGACAAATACGAAATCAACAAGAATAATGGAGGAGGAGGAGGAGGGTGTTCAAGCAATAGCACAGTGGAAGAGAATAGTAATAATAATAATGATAAGAAAAAAATAAGGCCTTATGTTAGATCCAAGTTTCCAAGGCTTCGTTGGACACCTGATCTTCACCTTAGATTTCTTCATGCTGTTCAAAGACTTGGAGGTCAAGAGAGAGCAACCCCAAAATTGGTTCTTCAATTGATGAACATCAAAGGATTAAGTATTGCCCATGTTAAGAGTCATTTACAGATGTTTAGAAGCAAAAAATTGGATGAACCAAATCATCAAGTATTGGCCAATCATCATGGTAGTCGTCTTATGGATACTGGAGACAGAAATATATATAATCTTAGCCAACTTCCAATGCTTCAAGGGTATAACCCAAGCACAATTTCATCCCACAGATTTGGATACGGGGATAATTCATTCACAAGTGCCTATGAAAAAATGGTGCATAGACCTTTCAATTGGGCTAATAGCATCTTCCGGGTTGGTTCTTCTTCCAATTTTATTGAGCAACAACAACAACAACAACCAATAATAACAAGTAATAGTAGTTTTAAAATCCATGAACCAAGAAAAGATGATCATGAATTCCTCTCATTTGGTAGTAATAGTAGTAGTGCACATGATCAATCTCTATGCACTAAAAGATTGAGCAATAATAATAATGTTGGTCTCACCCCATTATTATTATCATCACAAAATCCAAGAACACAAGACAATAATAACAATCATAACACCATCATGCCATTGAAAAGGAAGGCATCACCATCATCATCATCATCATTAGCTACTGAAAAAATTGATTTGGATCTTTCACTAAAATTGAACTCAAGGATAGATGGTGATGAAGAAAGAAGAGTGGAATTGGAGGATCATGATAATAACAATAATAATGATGATGATGATAACAATCTATCATTATCTTTGTACCCTCCTATTCAATCATCAACCTCTAATAATCTTAGAAGCAATAATAAGTTGAAGGAAGCACAAGATTGTTGCAAGAAGCAAGGGAAAATGGCTAGTACCCTGGATCTGACTATATGA 1158 0.3592 MEESHGSQCSKTSPSNLEEEEEDDDDKYEINKNNGGGGGGCSSNSTVEENSNNNNDKKKIRPYVRSKFPRLRWTPDLHLRFLHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMFRSKKLDEPNHQVLANHHGSRLMDTGDRNIYNLSQLPMLQGYNPSTISSHRFGYGDNSFTSAYEKMVHRPFNWANSIFRVGSSSNFIEQQQQQQPIITSNSSFKIHEPRKDDHEFLSFGSNSSSAHDQSLCTKRLSNNNNVGLTPLLLSSQNPRTQDNNNNHNTIMPLKRKASPSSSSSLATEKIDLDLSLKLNSRIDGDEERRVELEDHDNNNNNDDDDNNLSLSLYPPIQSSTSNNLRSNNKLKEAQDCCKKQGKMASTLDLTI* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2598 385 MobiDBLite consensus disorder prediction 36 51 - -
Amo02g2598 385 PANTHER - 3 385 - -
Amo02g2598 385 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 125 IPR017930 -
Amo02g2598 385 SUPERFAMILY Homeodomain-like 69 123 IPR009057 -
Amo02g2598 385 Gene3D - 69 125 - -
Amo02g2598 385 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 69 124 IPR006447 GO:0003677
Amo02g2598 385 Pfam Myb-like DNA-binding domain 71 119 IPR001005 -
Amo02g2598 385 MobiDBLite consensus disorder prediction 261 300 - -
Amo02g2598 385 MobiDBLite consensus disorder prediction 321 361 - -
Amo02g2598 385 MobiDBLite consensus disorder prediction 337 361 - -
Amo02g2598 385 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 385 IPR044848 GO:0003700
Amo02g2598 385 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2598 Amo-Chr2 82109349 82112038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2598 60 198 G2-like Transcription Factor Family AT2G42660 50.000 2.69e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo02g2598 Myb_DNA-binding 7.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2598 - - aip:107628479 657.136