Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2536 ATGGCAAAACATGAAAAACCACAACCTGGGTGTTTCTCTGGATTCTTGCGTGTGATCCTATGTGCTGGAACTGGAACTAGTCCTCCAGTTCATCCATCTCAAGATGAATCAGAAAATGTGGATTCAATTTCAAACAAAAGAGATGCATTGATCCATGAAGATTTTGCTGCTACCCCGGGATTGGTGGCAAGGCTAATGGGGTTGGATTCTGTTCCCAACACCAACTGTTTGATGAAAGGACACTCCCCAGATTCAGTTCCAAGGAGTAGGTCAGTGAATTTTGTGGACTACTTGCTAAATTTCGAAGTAGGCCAAGAAAATTTCCATCGCCGGGCGAAGACTTCGGCCTCGTTTCGCGAGGTTCCGGCATCTGCATTGGCTTATAGCCAGCAAAAACAAGATCATGATCTTGTTGTGTTTCATAACTGGGATTACAATGTGGTTAAGGATCATGAAGCTCGACGCGAGTCGAGGAAATTTGAAGTAGGGTTGATGAAAGAATCAAAGCAGGGGAAGAAACAGAGCAAAGAAACAGGGGAAAGGAATCAAAGGAAGAACAAGAAGATTTCAAAGTTGAAGAATGAACCTAGAAGGGTTCCTTCTAACTCTAATATGAATGGTAGAAAGGTTAGAAAGCAAAGTGAAGATAAAGATTGTTCTAGTGTCTCTTCATGTTCTTCAAAGAGTTATGGTTATAGATATAGTAGTAGTGGTGGTAATGGTGATTGTGATTCAAGCACAGGTTCTTGTTCTCCATTATTGCAAAGCAAGTATAAGAAAGAGTTTGTTGAATCAAATCTCAAAAACAAGATGAGAAAGAAGAAATCACCAAAGAAGATAGAGAGTGATTGTGTCTCAGAAAATCTCAGTCCAATTTCAGTTCTTGATGTCAATGATTCTCCTTCCCTCTATGGAACAACTTCTCTAGATGCTACACAACCCTTGCCTTCAAACTCAAAGTGGAAATCTTCACCACTGAGATCATCAAGCGATGGAATTGAAGCCACAAGAAGCAATGAGAAAGATGGTGCTTATGCCAACATTGACATCAACGGAGAAGTAGAATATTACTCAGAATTATTTTTAAAACTTTGCACAATGATAGAAAAGGATATAAGAGAGATAGATTGCACAACGAAGCATGTGCACGAGGATTTTGAGCAAATTTGTTTGGTGTTTGAACACAAAATTTTGGATCTTTTATTACACGAACTTGTTAATGATGTTGTGGAACTTCATGTTGATTTTTTTTTTTTTTTTGTGCGTGTGTGTATAAGTTAA 1281 0.388 MAKHEKPQPGCFSGFLRVILCAGTGTSPPVHPSQDESENVDSISNKRDALIHEDFAATPGLVARLMGLDSVPNTNCLMKGHSPDSVPRSRSVNFVDYLLNFEVGQENFHRRAKTSASFREVPASALAYSQQKQDHDLVVFHNWDYNVVKDHEARRESRKFEVGLMKESKQGKKQSKETGERNQRKNKKISKLKNEPRRVPSNSNMNGRKVRKQSEDKDCSSVSSCSSKSYGYRYSSSGGNGDCDSSTGSCSPLLQSKYKKEFVESNLKNKMRKKKSPKKIESDCVSENLSPISVLDVNDSPSLYGTTSLDATQPLPSNSKWKSSPLRSSSDGIEATRSNEKDGAYANIDINGEVEYYSELFLKLCTMIEKDIREIDCTTKHVHEDFEQICLVFEHKILDLLLHELVNDVVELHVDFFFFFVRVCIS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2536 426 MobiDBLite consensus disorder prediction 159 227 - -
Amo02g2536 426 Pfam DUF761-associated sequence motif 58 75 IPR032795 -
Amo02g2536 426 PANTHER ALC-INTERACTING PROTEIN 1 1 413 - -
Amo02g2536 426 MobiDBLite consensus disorder prediction 307 335 - -
Amo02g2536 426 PANTHER OS05G0128300 PROTEIN 1 413 - -
Amo02g2536 426 MobiDBLite consensus disorder prediction 307 333 - -
Amo02g2536 426 Coils Coil 175 195 - -
Amo02g2536 426 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2536 Amo-Chr2 79398064 79400543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2536 1 409 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 24.123 3.52e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2536 - - lang:109342337 305.064