Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2531 ATGGAGGGTCATCATCAACATCATCAACAACCACAACAACATCTTCTTCAACAAATTCTTCTACCGCATCATCAACAACAAAATATGATAATAAACGTGGATGGTGGTGGAGGAATTAGTGACAGGTTTCCACAGTGGAGCATACAAGAGACAAAAGAGTTTCTAATGATCCGTGCGGAGCTTGATCAAACTTTCATGGAGACAAAGAGGAACAAGCAATTGTGGCAAGTCATATCCAATAATATGAAGGAAAAGGGTTACCACAGAAGTGCAGAACAGTGCAAGTGCAAATGGAAAAACCTTGTTACCCGCTATAAGGGATGTGAAACAATGGAGCCAGAAGCAATGAGACAACAATTCCCATTCTACAATGAAATTCAAGCAATTTTCACATCAAGAAGCATGCAAAGAATGCTTTGGGGTGAAGGTGAAGGAACTTCAAAGAAGAACAAACCCATGCAACTCTCATCCGAAGAAGAAGAAGAAGAAGACAACGATGAAGATAGTGAAGAACAGCAAAAGGGTAGTACTAGAATGAGAAGAAAAAAGAAGAAAGCAAAGATAAGTAGTGGGAACAATAAGAATAGTGGTGATTTTCTGAATAATTTGAAGGAGATTCTTGAGGAGTTCATGAGGCAACAGATGCAAATGGAGGCGCAATGGATGGAGGCGTTCGAGTCGAGGGAGAAGGAGAGGAGGATGAAGGAGATGGAGTGGAGGCAAACAATGGAGGCTTTGGAGAATGAGAGGATAATGATGGATCAAAGATGGAGGGAGAGGGAAGAACAATGGAGGGTTAGGGAAGAAGTTAGGGCTCAAAATAGAGATGAACTAATCACAACCCTCTTACACAAACTACAACAACAAAGTGAAGATGATTTTTAG 885 0.4079 MEGHHQHHQQPQQHLLQQILLPHHQQQNMIINVDGGGGISDRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWQVISNNMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEPEAMRQQFPFYNEIQAIFTSRSMQRMLWGEGEGTSKKNKPMQLSSEEEEEEDNDEDSEEQQKGSTRMRRKKKKAKISSGNNKNSGDFLNNLKEILEEFMRQQMQMEAQWMEAFESREKERRMKEMEWRQTMEALENERIMMDQRWREREEQWRVREEVRAQNRDELITTLLHKLQQQSEDDF* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2531 294 Coils Coil 200 220 - -
Amo02g2531 294 CDD GT1 44 109 - -
Amo02g2531 294 Gene3D - 46 107 - -
Amo02g2531 294 ProSiteProfiles Myb-like domain profile. 46 102 IPR001005 -
Amo02g2531 294 MobiDBLite consensus disorder prediction 142 199 - -
Amo02g2531 294 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 290 - -
Amo02g2531 294 Pfam Myb/SANT-like DNA-binding domain 45 129 IPR044822 -
Amo02g2531 294 PANTHER - 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2531 Amo-Chr2 79289301 79290907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2531 41 293 Trihelix Transcription Factor Family AT5G01380 54.015 1.03e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo02g2531 Myb_DNA-bind_4 1.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2531 - - aip:107628470 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2300 12 103821043 103822453 Amo02g2531 02 79289301 79290907 hybridization