Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2523 ATGGCAACTCATCAATTGAACCACATGTTCAAAACATCCATGGTGAAGAATCACAAGAAACAACAACCAAGAACACCAAGGTTCCATGTCTTCAACAATGCAACAACATCTTCGACCACCACTCCTATGAGTGCTAGGAAGCTCATAGAATCTGGCACCGTGAAAACTATATTTCCCAAAGATGCTTCAATTGCCATGAATTCTGAAGGGTTTCTTCTCCTTGATGTTAGGCCAACATGGGAGACAGAGAAGGCACGTGTTGTTGGGTCTGTGCACATGCCAATCTTTGTTGAAGACACAGATAATAGCCCTGTAACATTACTTAAGAAATGGGTGCATTTTGGTTATATTGGACTATGGACTGGTCAATATCTAACTACATTGAACCCTGAGTTTCTTGGTCAAGTTGAAGTGGCTATTCCGGATAAGGGTACCAAGGTTCTTGTGGCTTGTGGAGAGGGATTAAGGTCAATGGCAGCAGCTTCAAAGTTATATAATGGAGGTTACAAAAATCTGGGATGGTTAGCCGGCGGCTTCAGCCGATCAAAGGACGACGACTTCCCTGGGATCGAAGGAACAGAGAAGTTGCAGTATGCTACAGTTGGAGGAGTCTCTTACTATTTTCTTCAGTTGCTTATACTTCTACAAGCAGTGGGTAAATGA 663 0.4299 MATHQLNHMFKTSMVKNHKKQQPRTPRFHVFNNATTSSTTTPMSARKLIESGTVKTIFPKDASIAMNSEGFLLLDVRPTWETEKARVVGSVHMPIFVEDTDNSPVTLLKKWVHFGYIGLWTGQYLTTLNPEFLGQVEVAIPDKGTKVLVACGEGLRSMAAASKLYNGGYKNLGWLAGGFSRSKDDDFPGIEGTEKLQYATVGGVSYYFLQLLILLQAVGK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2523 220 CDD RHOD 66 180 - -
Amo02g2523 220 Pfam Rhodanese-like domain 60 181 IPR001763 -
Amo02g2523 220 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 4 220 IPR044614 -
Amo02g2523 220 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 49 189 IPR036873 -
Amo02g2523 220 SMART rhod_4 57 188 IPR001763 -
Amo02g2523 220 Gene3D - 54 201 IPR036873 -
Amo02g2523 220 ProSiteProfiles Rhodanese domain profile. 67 191 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2523 Amo-Chr2 79045315 79046441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2523 5 207 Sulfurtransferasese or Rhodanese AT3G08920 55.882 1.12e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2523 - - gmx:100795945 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2139 12 99377694 99382431 Amo02g2523 02 79045315 79046441 hybridization