Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2511 ATGTCTTCAATTGCAATGACAACTGTTGCATCTTCCTTTATTGGAACACGTTTACCAGAGTTATATGCCAATTCAGGTAGAGTACAAGCCCGATTTGGCTTTGGATCTAAGAAAAGTAGCCCGGCCAAAAAAGGTTCTAGACAACCCACTTCAGATAGGCCGCTCTGGTACCCTGGTGCAAAGGCACCAGAATATCTAGATGGTAGTCTCGTAGGTGATTATGGGTTCGATCCGTTTGGCCTAGGAAAGCCAGCAGAGTACCTCCAATTTGACTTGGACTCACTTGATCAGAACTTAGCAAAGAACGTTGCAGGTGACGTGATTGGGACGAGGACAGAAGTGGCAGACGTGAAGGCAACGCCATTTCAACCGTACAGTGAGGTTTTTGGACTACAGAGGTTCAGAGAGTGTGAGCTCATACATGGAAGATGGGCTATGTTGGCCACTCTTGGTGCTCTCACAGTAGAATGGCTCACCGGTATTACATGGCAGGATGCTGGCAAGGTGGAGCTAATAGAAGGGTCACAATACCTAGGTCAACCACTTCCATTCTCGCTGACCACATTGATTTGGATTGAAGTTCTAGTGATTGGATACATAGAGTTCCAGAGGAATGCAGAGCTTGACCCAGAGAAGAGGCTTTACCCAGGTGGTAAGTTCTTTGACCCATTGGGCCTTGCTGAAGACCCAGAGAAGAAGGCCACACTTCAATTGGCTGAGATCAAACATGCTCGCCTTGCTATGGTTGCCTTTTTGGGCTTTGCTGTCCAGGCTGCTGTAACTGGGAAAGGCCCACTTAACAATTGGGCTACTCATTTGAGTGACCCACTCCACACTACCATCATTGACGCCTTCTCTTCCTCTTCTTGA 870 0.4759 MSSIAMTTVASSFIGTRLPELYANSGRVQARFGFGSKKSSPAKKGSRQPTSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDVIGTRTEVADVKATPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELIEGSQYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKATLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDAFSSSS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2511 289 Pfam Chlorophyll A-B binding protein 62 258 IPR022796 -
Amo02g2511 289 SUPERFAMILY Chlorophyll a-b binding protein 48 286 - -
Amo02g2511 289 Gene3D Chlorophyll a/b binding protein domain 56 289 - -
Amo02g2511 289 MobiDBLite consensus disorder prediction 33 57 - -
Amo02g2511 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 6 288 IPR001344 GO:0009765|GO:0016020
Amo02g2511 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 6 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2511 Amo-Chr2 78865348 78867644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2511 14 288 Chloroplast and Mitochondria Gene Families AT3G08940 84.058 7.12e-175 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2511 K08915 - rcu:8267514 520.776