Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2508 ATGGCTGCAAAACTTGAGGGTGGAGCTTATCTCTCTTCCTTTGTTGATGCTGTTTTGAAGAAGCTGTCTTCACTCGATGTCAACTCAACTCCAATGGCAAGGAAGCTAGCTGACCAGGACTTGCTGCAGAGGCTGAAGCTAAGTCTCCGTTCAGTTCGACCTGTGCTCGATGATGCTGAGCAGAAGCTGATTAGAAATGACCAAGAAGTCAAGAAATGGCTTCTTGATCTCCAAGATGCTCTCTACATGGCTGATGACTTGCTTGATGAACTCTCCACTAAAGCTGCCACTCTGACTCCCACTCAAAGGGATCCAGGTAACTATTCTTCCATGTGTCACTCTATCGTTGATTCAATCTTGGAAGATAGTGATGATGATGATTATGAGATGGGGGTAGCTGACCTAGTTGATAAACTAGAGTCTATTGTTGAAGAGAAAAATGGTCTTGGTCTAAAAGATGAGCCTGTCAGAGATCCAGAGGACATGTCATGGAGAATTGAGTCATCTCTGGTTGAAAGTTCTGAGATATTTGGAAGGGATAATGACAAGGAAGCCATCATAAAATTGTTGTTAGATGATACTTGTTATGCTAAAATATCTGTGATCCCCATTGTGGGAATGGGAGGAGTTGGAAAAACTACCTTAGCTCAGTTGGTTTACAATGACGAAAGAGTGGATGAGAAATTTGACATTAAAGCATGGGTGTGTGTTTCCGACCAATTTGACATTGTTAAGGTTACAAAGACCTTAATAGAAGCAGCAGGTGGTAGTTCTTATAATGGGAATTCTTTAGATTTACTTCAAACTGAGTTGAAGGATAAGTTGATGGGGAAGAAATTCTTGATTGTTTTGGATGACGTGTGGATTGATAATTCTTATTCCAGGCAGTGGAAAACCCTTCAGAAACCTTTTCAATTTGGAAAAAAAGGAAGCAAGGTTCTTGTTACAACTCGAAATGATACTACTGCTGATGTAGTGAAAACTATTTCAGCATACAAGCTGAGTTTATTGTCAGAGAAAGATTGTTGGTCACTTTTTTTGAAATGTGTATTCCTTTCATCTGAATCCAAGGAGTATTCGACACTGGAACCTGTTGGTCGAGAACTTGTCAAAAAGTGCAAAGGGCTACCTTTGGCTGTAGAGTCGCTTGGTGCCTTATTACGAACAAACTATGATGAAAGGGAATGGGATAGTGTACTGAAAAGTGAACTTTGGGAAGTTTTTGAAGATCAAAATGACGAGATTATTCCTGCATTAAGCATGAGCTATTATTATCTTCCTTCAACTTTAAAGCGATGCTTTGTTCATTGTTCTTTGTTTCCAAAAAATTACCTATTTGTTAAACATGAGCTGATCTTGCTATGGATAGCAGAAGAACTTTTACAGCCAAAAGGAAAAAAGGATCTAGAAGAAATTGGTTCTGAATATTTCGATCAATTGGTTGCGAGGTCCTTTCTTCAATCCTCTAGTACCTATAACAGCTTCTATGTCATTCATGATCTCATGCATGATTTGGCAACAACTCATGCTGGAGAATTCTACTTTAGAGCTGAAAAACTTGATGAACATATCAGGATCAACAATAAAACTCGGCATTTATCGCGTAACGCTAGAGGAAATTATCCCTTCGCACAAATTGTGGCAGCTTGTGGCAGGGTAAAAGATGCGAGAACACTTCTTGAAATAAGTTTTTGTCAAGAGTATCCTTTCGTGGCTCCATCTACCAAAGGGAAGAACTTTCTTCATGACTTTCTATCAAAGTTGAAATGCTTAAGAGTTTTGTCATTTAATGCCTTTCCTCTTTATTCGTTACCAGATTCAATAGGTAACTTGATCCATTTGCGATATTTGGATCTCTCAAATACGACGACGGAGATATTGCCTGAGGAGTTGTGTTGCTTGTACAATCTCCAAACATTGAAGTTGAAAAATTGTCGACTTCTGAAGAAGCTGCCCTGTAATATGCAAGATCTTGTTAATCTACGCCATCTTGATATTGATGGAGCTGGTCTTGAAGAGATGCCGAAAGGAATGAGCAAGTTGAAGGATTTGCAGTTTTTAAGTGACTATATTGTTGGCAAGCATGCAGATAATAATCAAATTAAAGAATTAGGAGCACTTGCAAATATTCAGGAGTCACTTCACGTTTGCCAATTAGAGAATATTGAGGATGGTGCTCAAGCTTTGGAGGCAAGAATTGCTGATAAGAAGCACATTAGGGTTCTATATTTGACGTGGTCCTCAAACAGCCACAGCCATATTGATGATTATCAAGATATACTGAATAATTTAAGGCCTCACACAAACTTGAGAGAGCTTTCAATCAAAGAGTACAAGGGTCTAACGTTTCCAAATTGGTTAGGACATTCTTCCTACAAAAGTATGACCAAACTGTACTTGTATGGCTGCAGCAACTGTTTAGAGCTTCCGTCACTTGGACACCTACCCTCTTTGAAGTGCTTGCGCCTCTCCAACTTTTACAAGCTACAACGCATCGGTGCTGAGTTTTACAAAGAGGATGGATCTTCTTCTCGTAAGGCAGCCTTTCCAGTGCTTGAAACTCTGAGTTTTGAAGGAATGGATTGCTGGGAGGAGTGGCTTTCAGTCTCATCTGAGTTGGATGCTTTTCCTCAGCTTAGGGAACTCACAGTGCGACGTTGCCCTGCATTAAGGGGAGATTTGCCGATTCAACTACTGGCTTTGCAAAGCCTTTGCATTGATCAATGTGGCCAGCTTGATTTTTCTCTCCCAAGAGCTGATGCATTGCTCGAGTTATCAGTTGAAGGACCCCAGAAGGTGGAGGCAGTGTTGAAGGCCATTGCAGGCAACCAACTAAACTGTCTACAGTCTTTAAGCATCACAAACTGTTGTTCAGCCACATCATTTCTGGTAGGTTCGATGCCCTCTTCATTGCAACACTTGGTAATCAACGGCTGCCCATATATAGAGCTCCCAGTGCTGCAGCAGCAGCATGAGTCATTACAATCGATATCAATATCTAACAGTTGTCATTCGCTCACTTCCTTCCCCTTGGCAAGCTTTCCGAACCTCACCACACTCAGAATTTCATCCTGTATAAATTTGAGGTCACTTTTGGCATCAGATCCTACTTCTGCTTCAACTTCAGCTTCAAGTCTCCACTCTTTAACCATCGAAAGCTGCCCAAGTTTGGGATCTTTTCCCACACTAGAGATGGTTGCACCCCATCTAGAGTATCTCTTGCTTCGAGAATGCCCAGAAATTGAATCCTTTTTTGAAGGGGGTTTGCCACCTAACCTGAGAGAGCTTAAAATCCAGCATTGTGAGAAACTGGTGAAGTACCTAGCATCCATGGACTTGTGTGATCACTGTCTTACCTGTCTTGACATCCGACATCCATATGATAATATCAAATCCTTCCCCATGGGCGGTTCCCTGCCGGCCTCCCTTGAGACTCTCAATCTGCGAAGCTTTCCATGTCTAGAAATCTTAGACTGCAAGGGACTTGACCATCTCCAGCGTCTATTGATAGATTATTGTCCCAGACTGGATGTTGCAGGGGAAAGCTTTCCTGCCTCTCTGTCAATGCTCCACTTAAATGGACCTTCTTTGCTGAGGAAACGGTTAGGGATAAATGACTAG 3621 0.414 MAAKLEGGAYLSSFVDAVLKKLSSLDVNSTPMARKLADQDLLQRLKLSLRSVRPVLDDAEQKLIRNDQEVKKWLLDLQDALYMADDLLDELSTKAATLTPTQRDPGNYSSMCHSIVDSILEDSDDDDYEMGVADLVDKLESIVEEKNGLGLKDEPVRDPEDMSWRIESSLVESSEIFGRDNDKEAIIKLLLDDTCYAKISVIPIVGMGGVGKTTLAQLVYNDERVDEKFDIKAWVCVSDQFDIVKVTKTLIEAAGGSSYNGNSLDLLQTELKDKLMGKKFLIVLDDVWIDNSYSRQWKTLQKPFQFGKKGSKVLVTTRNDTTADVVKTISAYKLSLLSEKDCWSLFLKCVFLSSESKEYSTLEPVGRELVKKCKGLPLAVESLGALLRTNYDEREWDSVLKSELWEVFEDQNDEIIPALSMSYYYLPSTLKRCFVHCSLFPKNYLFVKHELILLWIAEELLQPKGKKDLEEIGSEYFDQLVARSFLQSSSTYNSFYVIHDLMHDLATTHAGEFYFRAEKLDEHIRINNKTRHLSRNARGNYPFAQIVAACGRVKDARTLLEISFCQEYPFVAPSTKGKNFLHDFLSKLKCLRVLSFNAFPLYSLPDSIGNLIHLRYLDLSNTTTEILPEELCCLYNLQTLKLKNCRLLKKLPCNMQDLVNLRHLDIDGAGLEEMPKGMSKLKDLQFLSDYIVGKHADNNQIKELGALANIQESLHVCQLENIEDGAQALEARIADKKHIRVLYLTWSSNSHSHIDDYQDILNNLRPHTNLRELSIKEYKGLTFPNWLGHSSYKSMTKLYLYGCSNCLELPSLGHLPSLKCLRLSNFYKLQRIGAEFYKEDGSSSRKAAFPVLETLSFEGMDCWEEWLSVSSELDAFPQLRELTVRRCPALRGDLPIQLLALQSLCIDQCGQLDFSLPRADALLELSVEGPQKVEAVLKAIAGNQLNCLQSLSITNCCSATSFLVGSMPSSLQHLVINGCPYIELPVLQQQHESLQSISISNSCHSLTSFPLASFPNLTTLRISSCINLRSLLASDPTSASTSASSLHSLTIESCPSLGSFPTLEMVAPHLEYLLLRECPEIESFFEGGLPPNLRELKIQHCEKLVKYLASMDLCDHCLTCLDIRHPYDNIKSFPMGGSLPASLETLNLRSFPCLEILDCKGLDHLQRLLIDYCPRLDVAGESFPASLSMLHLNGPSLLRKRLGIND* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2508 1206 Gene3D Ribonuclease Inhibitor 570 959 IPR032675 -
Amo02g2508 1206 Pfam NB-ARC domain 180 423 IPR002182 GO:0043531
Amo02g2508 1206 Pfam Rx N-terminal domain 14 97 IPR041118 -
Amo02g2508 1206 Gene3D Ribonuclease Inhibitor 966 1200 IPR032675 -
Amo02g2508 1206 Gene3D - 336 421 IPR042197 -
Amo02g2508 1206 Gene3D - 15 122 - -
Amo02g2508 1206 Coils Coil 719 739 - -
Amo02g2508 1206 SUPERFAMILY L domain-like 498 909 - -
Amo02g2508 1206 Gene3D - 162 331 IPR027417 -
Amo02g2508 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 437 IPR027417 -
Amo02g2508 1206 PRINTS Disease resistance protein signature 201 216 - -
Amo02g2508 1206 PRINTS Disease resistance protein signature 274 288 - -
Amo02g2508 1206 PRINTS Disease resistance protein signature 373 387 - -
Amo02g2508 1206 PRINTS Disease resistance protein signature 813 829 - -
Amo02g2508 1206 PANTHER DISEASE RESISTANCE PROTEIN RP 23 981 IPR044974 GO:0006952
Amo02g2508 1206 PANTHER OS05G0414200 PROTEIN 23 981 - -
Amo02g2508 1206 SUPERFAMILY L domain-like 944 1197 - -
Amo02g2508 1206 Gene3D - 422 509 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2508 Amo-Chr2 78799347 78804775 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2508 199 384 WRKY Transcription Factor Family AT5G45050 25.510 4.45e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2508 - - adu:107475166 2005.72