Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2506 ATGGCTGCAAAACTTGAGGGTGGAGCTTATCTCTCTTCCTTTGTTGATGCTGTTTTGAAGAAGCTGTCTTCACTCGATGTCAACTCAACTCCAATGGCAAGGAAGCTAGCTGACCAGGACTTGCTGCAGAGGCTGAAGCTAAGTCTCCGTTCAGTTCGACCTGTGCTCGATGATGCTGAGCAGAAGCTGATTAGAAATGACCAAGAAGTCAAGAAATGGCTTCTTGATCTCCAAGATGCTCTCTACATGGCTGATGACTTGCTTGATGAACTCTCCACTAAAGCTGCCACTCTGACTCCCACTCAAAGGGATCCAGGTAACTATTCTTCCATGTGTCACTCTATCGTTGATTCAATCTTGGAAGATAGTGATGATGATGATTATGAGATGGGGGTAGCTGACCTAGTTGATAAACTAGAGTCTATTGTTGAAGAGAAAAATGGTCTTGGTCTAAAAGATGAGCCTGTCAGAGATCCAGAGGACATGTCATGGAGAATTGAGTCATCTCTGGTTGAAAGTTCTGAGATATTTGGAAGGGATAATGACAAGGAAGCCATCATAAAATTGTTGTTAGATGATACTTGTTATGCTAAAATATCTGTGATCCCCATTGTGGGAATGGGAGGAGTTGGAAAAACTACCTTAGCTCAGTTGGTTTACAATGACGAAAGAGTGGATGAGAAATTTGACATTAAAGCATGGGTGTGTGTTTCCGACCAATTTGACATTGTTAAGGTTACAAAGACCTTAATAGAAGCAGCAGGTGGTAGTTCTTATAATGGGAATTCTTTAGATTTACTTCAAACTGAGTTGAAGGATAAGTTGATGGGGAAGAAATTCTTGATTGTTTTGGATGACGTGTGGATTGATAATTCTTATTCCAGGCAGTGGAAAACCCTTCAGAAACCTTTTCAATTTGGAAAAAAAGGAAGCAAGGTTCTTGTTACAACTCGAAATGATACTACTGCTGATGTAGTGAAAACTATTTCAGCATACAAGCTGAGTTTATTGTCAGAGAAAGATTGTTGGTCACTTTTTTTGAAATGTGTATTCCTTTCATCTGAATCCAAGGAGTATTCGACACTGGAACCTGTTGGTCGAGAACTTGTCAAAAAGTGCAAAGGGCTACCTTTGGCTGTAGAGTCGCTTGGTGCCTTATTACGAACAAACTATGATGAAAGGGAATGGGATAGTGTACTGAAAAGTGAACTTTGGGAAGTTTTTGAAGATCAAAATGACGAGATTATTCCTGCATTAAGCATGAGCTATTATTATCTTCCTTCAACTTTAAAGCGATGCTTTGTTCATTGTTCTTTGTTTCCAAAAAATTACCTATTTGTTAAACATGAGCTGATCTTGCTATGGATAGCAGAAGAACTTTTACAGCCAAAAGGAAAAAAGGATCTAGAAGAAATTGGTTCTGAATATTTCGATCAATTGGTTGCGAGGTCCTTTCTTCAATCCTCTAGTACCTATAACAGCTTCTATGTCATTCATGATCTCATGCATGATTTGGCAACAACTCATGCTGGAGAATTCTACTTTAGAGCTGAAAAACTTGATGAACATATCAGGATCAACAATAAAACTCGGCATTTATCGCGTAACGCTAGAGGAAATTATCCCTTCGCACAAATTGTGGCAGCTTGTGGCAGGGTAAAAGATGCGAGAACACTTCTTGAAATAAGTTTTTGTCAAGAGTATCCTTTCGTGGCTCCATCTACCAAAGGGAAGAACTTTCTTCATGACTTTCTATCAAAGTTGAAATGCTTAAGAGTTTTGTCATTTAATGCCTTTCCTCTTTATTCGTTACCAGATTCAATAGGTAACTTGATCCATTTGCGATATTTGGATCTCTCAAATACGACGACGGAGATATTGCCTGAGGAGTTGTGTTGCTTGTACAATCTCCAAACATTGAAGTTGAAAAATTGTCGACTTCTGAAGAAGCTGCCCTGTAATATGCAAGATCTTGTTAATCTACGCCATCTTGATATTGATGGAGCTGGTCTTGAAGAGATGCCGAAAGGAATGAGCAAGTTGAAGGATTTGCAGTTTTTAAGTGACTATATTGTTGGCAAGCATGCAGATAATAATCAAATTAAAGAATTAGGAGCACTTGCAAATATTCAGGAGTCACTTCACGTTTGCCAATTAGAGAATATTGAGGATGGTGCTCAAGCTTTGGAGGCAAGAATTGCTGATAAGAAGCACATTAGGGTTCTATATTTGACGTGGTCCTCAAACAGCCACAGCCATATTGATGATTATCAAGATATACTGAATAATTTAAGGCCTCACACAAACTTGAGAGAGCTTTCAATCAAAGAGTACAAGGGTCTAACGTTTCCAAATTGGTTAGGACATTCTTCCTACAAAAGTATGACCAAACTGTACTTGTATGGCTGCAGCAACTGTTTAGAGCTTCCGTCACTTGGACACCTACCCTCTTTGAAGTGCTTGCGCCTCTCCAACTTTTACAAGCTACAACGCATCGGTGCTGAGTTTTACAAAGAGGATGGATCTTCTTCTCGTAAGGCAGCCTTTCCAGTGCTTGAAACTCTGAGTTTTGAAGGAATGGATTGCTGGGAGGAGTGGCTTTCAGTCTCATCTGAGTTGGATGCTTTTCCTCAGCTTAGGGAACTCACAGTGCGACGTTGCCCTGCATTAAGGGGAGATTTGCCGATTCAACTACTGGCTTTGCAAAGCCTTTGCATTGATCAATGTGGCCAGCTTGATTTTTCTCTCCCAAGAGCTGATGCATTGCTCGAGTTATCAGTTGAAGGACCCCAGAAGGTGGAGGCAGTGTTGAAGGCCATTGCAGGCAACCAACTAAACTGTCTACAGTCTTTAAGCATCACAAACTGTTGTTCAACCACATCATTTCTGGTAGGTTCGATGCCCTCTTCATTGCAACACTTGGTAATCAACGGCTGCCCATATATAGAGCTCCCAGTGCTGCAGCAGCAGCATGAGTCATTACAATCGATATCAATATCTAACAGTTGTCATTCGCTCACTTCCTTCCCCTTGGCAAGCTTTCCGAACCTCACCACACTCAGAATTTCATCCTGTATAAATTTGAGGTCACTTTTGGCATCAGATCCTACTTCTGCTTCAACTTCAGCTTCAAGTCTCCACTCTTTAACCATCGAAAGCTGCCCAAGTTTGGGATCTTTTCCCACACTAGAGATGGTTGCACCCCATCTAGAGTATCTCTTGCTTCGAGAATGCCCAGAAATTGAATCCTTTTTTGAAGGGGGTTTGCCACCTAACCTGAGAGAGCTTAAAATCCAGCATTGTGAGAAACTGGTGAAGTACCTAGCATCCATGGACTTGTGTGATCACTGTCTTACCTGTCTTGACATCCGACATCCATATGATAATATCAAATCCTTCCCCATGGGCGGTTCCCTGCCGGCCTCCCTTGAGACTCTCAATCTGCGAAGCTTTCCATGTCTAGAAATCTTAGACTGCAAGGGACTTGACCATCTCCAGCGTCTATTGATAGATTATTGTCCCAGACTGGATGTTGCAGGGGAAAATACACTTTACCATCTTATTCCAAACTCCTTTCCCCAATGCCCTTGTGTACAAGTTAAATTGGCGAATCCAGTTAGGCTGCATGGCACCCCACCTTGTATAGCATCTTTGGTGAAAAAGATGATGAAATCCACCATGGGGAACTCAAGACAATCTTTATCATCCCAAGTAGGAAATGAAGGAGCAGAGGACTTTGGATAA 3744 0.4132 MAAKLEGGAYLSSFVDAVLKKLSSLDVNSTPMARKLADQDLLQRLKLSLRSVRPVLDDAEQKLIRNDQEVKKWLLDLQDALYMADDLLDELSTKAATLTPTQRDPGNYSSMCHSIVDSILEDSDDDDYEMGVADLVDKLESIVEEKNGLGLKDEPVRDPEDMSWRIESSLVESSEIFGRDNDKEAIIKLLLDDTCYAKISVIPIVGMGGVGKTTLAQLVYNDERVDEKFDIKAWVCVSDQFDIVKVTKTLIEAAGGSSYNGNSLDLLQTELKDKLMGKKFLIVLDDVWIDNSYSRQWKTLQKPFQFGKKGSKVLVTTRNDTTADVVKTISAYKLSLLSEKDCWSLFLKCVFLSSESKEYSTLEPVGRELVKKCKGLPLAVESLGALLRTNYDEREWDSVLKSELWEVFEDQNDEIIPALSMSYYYLPSTLKRCFVHCSLFPKNYLFVKHELILLWIAEELLQPKGKKDLEEIGSEYFDQLVARSFLQSSSTYNSFYVIHDLMHDLATTHAGEFYFRAEKLDEHIRINNKTRHLSRNARGNYPFAQIVAACGRVKDARTLLEISFCQEYPFVAPSTKGKNFLHDFLSKLKCLRVLSFNAFPLYSLPDSIGNLIHLRYLDLSNTTTEILPEELCCLYNLQTLKLKNCRLLKKLPCNMQDLVNLRHLDIDGAGLEEMPKGMSKLKDLQFLSDYIVGKHADNNQIKELGALANIQESLHVCQLENIEDGAQALEARIADKKHIRVLYLTWSSNSHSHIDDYQDILNNLRPHTNLRELSIKEYKGLTFPNWLGHSSYKSMTKLYLYGCSNCLELPSLGHLPSLKCLRLSNFYKLQRIGAEFYKEDGSSSRKAAFPVLETLSFEGMDCWEEWLSVSSELDAFPQLRELTVRRCPALRGDLPIQLLALQSLCIDQCGQLDFSLPRADALLELSVEGPQKVEAVLKAIAGNQLNCLQSLSITNCCSTTSFLVGSMPSSLQHLVINGCPYIELPVLQQQHESLQSISISNSCHSLTSFPLASFPNLTTLRISSCINLRSLLASDPTSASTSASSLHSLTIESCPSLGSFPTLEMVAPHLEYLLLRECPEIESFFEGGLPPNLRELKIQHCEKLVKYLASMDLCDHCLTCLDIRHPYDNIKSFPMGGSLPASLETLNLRSFPCLEILDCKGLDHLQRLLIDYCPRLDVAGENTLYHLIPNSFPQCPCVQVKLANPVRLHGTPPCIASLVKKMMKSTMGNSRQSLSSQVGNEGAEDFG* 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2506 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 437 IPR027417 -
Amo02g2506 1247 SUPERFAMILY L domain-like 944 1181 - -
Amo02g2506 1247 Pfam Rx N-terminal domain 14 97 IPR041118 -
Amo02g2506 1247 PANTHER OS05G0414200 PROTEIN 23 961 - -
Amo02g2506 1247 SUPERFAMILY L domain-like 498 909 - -
Amo02g2506 1247 PRINTS Disease resistance protein signature 373 387 - -
Amo02g2506 1247 PRINTS Disease resistance protein signature 201 216 - -
Amo02g2506 1247 PRINTS Disease resistance protein signature 274 288 - -
Amo02g2506 1247 PRINTS Disease resistance protein signature 813 829 - -
Amo02g2506 1247 Gene3D Ribonuclease Inhibitor 571 926 IPR032675 -
Amo02g2506 1247 Gene3D Ribonuclease Inhibitor 927 1204 IPR032675 -
Amo02g2506 1247 Coils Coil 719 739 - -
Amo02g2506 1247 PANTHER DISEASE RESISTANCE PROTEIN RP 23 961 IPR044974 GO:0006952
Amo02g2506 1247 MobiDBLite consensus disorder prediction 1228 1247 - -
Amo02g2506 1247 Gene3D - 15 122 - -
Amo02g2506 1247 Gene3D - 422 509 IPR036388 -
Amo02g2506 1247 Pfam NB-ARC domain 180 423 IPR002182 GO:0043531
Amo02g2506 1247 Gene3D - 162 331 IPR027417 -
Amo02g2506 1247 Gene3D - 336 421 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2506 Amo-Chr2 78720727 78729710 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2506 199 384 WRKY Transcription Factor Family AT5G45050 25.510 5.13e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2506 - - adu:107475166 1996.09